RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 ERI3O43414 337 aaKnown RBP8.93□□□□□ -0.98
VPS52-216ENST00000471309 TMPRSS11DO60235 418 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 CTSVO60911 334 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 ANP32DO95626 131 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 B3GALT4O96024 378 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 PROS1P07225 676 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 ANPEPP15144 967 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 ATP6V1B2P21281 511 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 HIST1H1TP22492 207 aaPredicted RBP8.93□□□□□ -0.98
VPS52-216ENST00000471309 EPHA8P29322 1005 aaPredicted RBP8.93□□□□□ -0.98
VPS52-216ENST00000471309 CNR2P34972 360 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 HOXD12P35452 270 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 MSX2P35548 267 aaPredicted RBP8.93□□□□□ -0.98
VPS52-216ENST00000471309 PLA2G16P53816 162 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 PLIN5Q00G26 463 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 BNC1Q01954 994 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 RHDQ02161 417 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 SLC34A1Q06495 639 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 SRSF5Q13243 272 aaKnown RBP8.93□□□□□ -0.98
VPS52-216ENST00000471309 BIRC2Q13490 618 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 SHBQ15464 509 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 MUM1Q2TAK8 710 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 GTDC1Q4AE62 458 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 AASDHQ4L235 1098 aaPredicted RBP8.93□□□□□ -0.98
VPS52-216ENST00000471309 ZNF385BQ569K4 471 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 IRAK1BP1Q5VVH5 260 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 ZFP1Q6P2D0 407 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 FBXO42Q6P3S6 717 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 ZNF793Q6ZN11 406 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 GPR155Q7Z3F1 870 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 ZNF438Q7Z4V0 828 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 DHFR2Q86XF0 187 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 CLECL1Q8IZS7 167 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 ZNF655Q8N720 491 aaPredicted RBP8.93□□□□□ -0.98
VPS52-216ENST00000471309 DTWD2Q8NBA8 298 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 HIPK4Q8NE63 616 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 TNIP2Q8NFZ5 429 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 GOT1L1Q8NHS2 421 aaPredicted RBP8.93□□□□□ -0.98
VPS52-216ENST00000471309 RERGQ96A58 199 aaPredicted RBP8.93□□□□□ -0.98
VPS52-216ENST00000471309 MIEF2Q96C03 454 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 TM4SF18Q96CE8 201 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 DUS3LQ96G46 650 aaKnown RBP8.93□□□□□ -0.98
VPS52-216ENST00000471309 PHF12Q96QT6 1004 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 SLC38A3Q99624 504 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 ROGDIQ9GZN7 287 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 RAB33BQ9H082 229 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 KLHL31Q9H511 634 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 KAT8Q9H7Z6 458 aaKnown RBP8.93□□□□□ -0.98
VPS52-216ENST00000471309 PRDM7Q9NQW5 492 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 SLC6A13Q9NSD5 602 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 LYARQ9NX58 379 aaKnown RBP8.93□□□□□ -0.98
VPS52-216ENST00000471309 EHD3Q9NZN3 535 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 SH3BP4Q9P0V3 963 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 GMPR2Q9P2T1 348 aaKnown RBP8.93□□□□□ -0.98
VPS52-216ENST00000471309 STOML1Q9UBI4 398 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 MAGEL2Q9UJ55 1249 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 PCDHB3Q9Y5E6 796 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 PCDHB14Q9Y5E9 798 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 SNX13Q9Y5W8 968 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 SNX11Q9Y5W9 270 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 HEATR5BQ9P2D3 2071 aa8.93□□□□□ -0.98
VPS52-216ENST00000471309 SNRNP200O75643 2136 aaKnown RBP8.93□□□□□ -0.98
VPS52-216ENST00000471309 ARHGEF17Q96PE2 2063 aaPredicted RBP8.92□□□□□ -0.98
VPS52-216ENST00000471309 A0A0J9YVX5 310 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 TCRBV3S1A0A5B6 114 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 C1orf226A1L170 272 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 URADA6NGE7 173 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 AQP12BA6NM10 295 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 H3BNX3 289 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 NVLO15381 856 aaKnown RBP8.92□□□□□ -0.98
VPS52-216ENST00000471309 P2RX6O15547 441 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 GPR37L1O60883 481 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 GUCY1B2O75343 617 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 EPN2O95208 641 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 STATHP02808 62 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 GSNP06396 782 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 FAM58BPP0C7Q3 252 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 GIMD1P0DJR0 217 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 DRD2P14416 443 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 PVRP15151 417 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 TYRP1P17643 537 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 PPIBP23284 216 aaKnown RBP8.92□□□□□ -0.98
VPS52-216ENST00000471309 ATP5A1P25705 553 aaKnown RBP8.92□□□□□ -0.98
VPS52-216ENST00000471309 GCKP35557 465 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 ERFP50548 548 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 PPP1CAP62136 330 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 MRPS22P82650 360 aaKnown RBP8.92□□□□□ -0.98
VPS52-216ENST00000471309 MC1RQ01726 317 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 SLC9A5Q14940 896 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 NR1D2Q14995 579 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 ZNF528Q3MIS6 628 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 MANEAQ5SRI9 462 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 MRM1Q6IN84 353 aaKnown RBP8.92□□□□□ -0.98
VPS52-216ENST00000471309 RABEPKQ7Z6M1 372 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 SPATA24Q86W54 205 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 CALHM3Q86XJ0 350 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 TICAM1Q8IUC6 712 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 AQP12AQ8IXF9 295 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 SLC25A45Q8N413 288 aa8.92□□□□□ -0.98
VPS52-216ENST00000471309 ACOT4Q8N9L9 421 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms