RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 OR2L8Q8NGY9 312 aa8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 RFWD2Q8NHY2 731 aa8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 M1APQ8TC57 530 aa8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 TCP10LQ8TDR4 215 aa8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 MZB1Q8WU39 189 aa8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 SLC44A1Q8WWI5 657 aa8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 MMABQ96EY8 250 aaPredicted RBP8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 OXNAD1Q96HP4 312 aaPredicted RBP8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 TMEM237Q96Q45 408 aa8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 FERMT1Q9BQL6 677 aa8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 TSSK1BQ9BXA7 367 aa8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 SLC6A16Q9GZN6 736 aa8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 IQCGQ9H095 443 aaKnown RBP8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 CLEC4MQ9H2X3 399 aaPredicted RBP8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 MANSC1Q9H8J5 431 aa8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 LRFN1Q9P244 771 aa8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 SLC17A7Q9P2U7 560 aa8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 GNPTGQ9UJJ9 305 aa8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 L3MBTL1Q9Y468 752 aa8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 SCN2AQ99250 2005 aa8.4□□□□□ -1.06
SYNGAP1-205ENST00000470232 NSD1Q96L73 2696 aaPredicted RBP8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 AKAP6Q13023 2319 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 CSPG4Q6UVK1 2322 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 TRBV5-4A0A0C4DH59 114 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 A0A0J9YVX5 310 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 A0A1B0GTH9 108 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 SLC5A10A0PJK1 596 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 KIAA1324LA8MWY0 1029 aaPredicted RBP8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 TRIM49D1C9J1S8 452 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 TXNDC9O14530 226 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 COPEO14579 308 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 TFECO14948 347 aaPredicted RBP8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 RPSAP08865 295 aaKnown RBP8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 GSTA2P09210 222 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 SLC18A2Q05940 514 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 PMPCAQ10713 525 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 FASTKQ14296 549 aaKnown RBP8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 PRPSAP1Q14558 356 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 GARNL3Q5VVW2 1013 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 FCRLBQ6BAA4 426 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 ITPRIPL1Q6GPH6 555 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 FRMPD2BQ6IN97 320 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 ARSKQ6UWY0 536 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 C4orf22Q6V702 233 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 PRIMA1Q86XR5 153 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 CRLF3Q8IUI8 442 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 IGDCC3Q8IVU1 814 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 DCUN1D3Q8IWE4 304 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 CTAGE3PQ8IX95 158 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 ZNF567Q8N184 647 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 DTWD1Q8N5C7 304 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 LMNTD1Q8N9Z9 388 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 LINC01555Q8NAE3 123 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 OR10Q1Q8NGQ4 319 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 WNT2BQ93097 391 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 UTP4Q969X6 686 aaKnown RBP8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 TMEM125Q96AQ2 219 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 ARSGQ96EG1 525 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 TTC1Q99614 292 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 ZFYVE21Q9BQ24 234 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 SARGQ9BW04 601 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 HES7Q9BYE0 225 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 VPS11Q9H270 941 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 C12orf65Q9H3J6 166 aaKnown RBP8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 LIME1Q9H400 295 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 ZNF395Q9H8N7 513 aaPredicted RBP8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 NEUROD4Q9HD90 331 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 SAR1AQ9NR31 198 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 RAB6BQ9NRW1 208 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 RASSF1Q9NS23 344 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 ZNF358Q9NW07 568 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 ANKRD10Q9NXR5 420 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 UTP6Q9NYH9 597 aaKnown RBP8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 DCTN4Q9UJW0 460 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 MTO1Q9Y2Z2 717 aaKnown RBP8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 AAR2Q9Y312 384 aaKnown RBP8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 KLK4Q9Y5K2 254 aa8.39□□□□□ -1.07
SYNGAP1-205ENST00000470232 LOC105369274A0A096LPK9 316 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 LOC102723532A0A0G2JNH3 316 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 GABRR3A8MPY1 467 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 HACD1B0YJ81 288 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 KLRC4-KLRK1H3BQV0 150 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 ZNHIT1O43257 154 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 CDC40O60508 579 aaKnown RBP eCLIP8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 CTSVO60911 334 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 SLC25A12O75746 678 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 PIAS1O75925 651 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 SEC24DO94855 1032 aaPredicted RBP8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 RAF1P04049 648 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 SNRPAP09012 282 aaKnown RBP8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 BGNP21810 368 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 RBL1P28749 1068 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 KIR2DL3P43628 341 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 AVPR1BP47901 424 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 CDKN1CP49918 316 aaPredicted RBP8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 AGTR2P50052 363 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 PPP2R2BQ00005 443 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 CDK16Q00536 496 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 KEAP1Q14145 624 aa8.38□□□□□ -1.07
SYNGAP1-205ENST00000470232 NDUFA9Q16795 377 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms