RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TGFBR3LH3BV60 316 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 PSMD12O00232 456 aaPredicted RBP22.89■■□□□ 1.25
PTCH1-210ENST00000468211 TAPBPO15533 448 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 NME2P1O60361 137 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 PRAMEF4O60810 478 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 SLC25A12O75746 678 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 TBX6O95947 436 aaPredicted RBP22.89■■□□□ 1.25
PTCH1-210ENST00000468211 NCF1P14598 390 aaPredicted RBP22.89■■□□□ 1.25
PTCH1-210ENST00000468211 NME2P22392 152 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 HNMTP50135 292 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 HNRNPFP52597 415 aaKnown RBP22.89■■□□□ 1.25
PTCH1-210ENST00000468211 HSF1Q00613 529 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 CBLBQ13191 982 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 SLBPQ14493 270 aaKnown RBP eCLIP22.89■■□□□ 1.25
PTCH1-210ENST00000468211 CDSNQ15517 529 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 KRTCAP3Q53RY4 240 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 FBXO48Q5FWF7 155 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 PRAMEF9Q5VWM5 478 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 ADNP2Q6IQ32 1131 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 FRA10AC1Q70Z53 315 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 ADAMTSL2Q86TH1 951 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 CHERPQ8IWX8 916 aaKnown RBP22.89■■□□□ 1.25
PTCH1-210ENST00000468211 MCEMP1Q8IX19 187 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 CPSF7Q8N684 471 aaKnown RBP22.89■■□□□ 1.25
PTCH1-210ENST00000468211 ADAMTS18Q8TE60 1221 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 KRT12Q99456 494 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 NAPGQ99747 312 aaPredicted RBP22.89■■□□□ 1.25
PTCH1-210ENST00000468211 TMEM79Q9BSE2 394 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 TRIM45Q9H8W5 580 aaPredicted RBP22.89■■□□□ 1.25
PTCH1-210ENST00000468211 CLDN16Q9Y5I7 305 aa22.89■■□□□ 1.25
PTCH1-210ENST00000468211 ENO4A6NNW6 628 aa22.88■■□□□ 1.25
PTCH1-210ENST00000468211 CCDC188H7C350 402 aa22.88■■□□□ 1.25
PTCH1-210ENST00000468211 GNAZP19086 355 aa22.88■■□□□ 1.25
PTCH1-210ENST00000468211 HTR1EP28566 365 aa22.88■■□□□ 1.25
PTCH1-210ENST00000468211 PPP2R1BP30154 601 aa22.88■■□□□ 1.25
PTCH1-210ENST00000468211 SSTR1P30872 391 aa22.88■■□□□ 1.25
PTCH1-210ENST00000468211 TGFBIQ15582 683 aa22.88■■□□□ 1.25
PTCH1-210ENST00000468211 RPTNQ6XPR3 784 aa22.88■■□□□ 1.25
PTCH1-210ENST00000468211 BNC2Q6ZN30 1099 aaPredicted RBP22.88■■□□□ 1.25
PTCH1-210ENST00000468211 Q6ZPB1 254 aaPredicted RBP22.88■■□□□ 1.25
PTCH1-210ENST00000468211 NCCRP1Q6ZVX7 275 aaPredicted RBP22.88■■□□□ 1.25
PTCH1-210ENST00000468211 VN1R5Q7Z5H4 357 aa22.88■■□□□ 1.25
PTCH1-210ENST00000468211 SPPL2CQ8IUH8 684 aa22.88■■□□□ 1.25
PTCH1-210ENST00000468211 HORMAD2Q8N7B1 307 aa22.88■■□□□ 1.25
PTCH1-210ENST00000468211 APCDD1LQ8NCL9 501 aa22.88■■□□□ 1.25
PTCH1-210ENST00000468211 TMEM52Q8NDY8 209 aa22.88■■□□□ 1.25
PTCH1-210ENST00000468211 MS4A6EQ96DS6 147 aa22.88■■□□□ 1.25
PTCH1-210ENST00000468211 MAGED4Q96JG8 741 aa22.88■■□□□ 1.25
PTCH1-210ENST00000468211 PDLIM2Q96JY6 352 aa22.88■■□□□ 1.25
PTCH1-210ENST00000468211 ZNF223Q9UK11 482 aaPredicted RBP22.88■■□□□ 1.25
PTCH1-210ENST00000468211 LRIT2A6NDA9 550 aa22.87■■□□□ 1.25
PTCH1-210ENST00000468211 ASNA1O43681 348 aa22.87■■□□□ 1.25
PTCH1-210ENST00000468211 TRHRP34981 398 aaPredicted RBP22.87■■□□□ 1.25
PTCH1-210ENST00000468211 CYB561P49447 251 aa22.87■■□□□ 1.25
PTCH1-210ENST00000468211 STXBP1P61764 594 aaKnown RBP22.87■■□□□ 1.25
PTCH1-210ENST00000468211 ZNF630Q2M218 657 aaPredicted RBP22.87■■□□□ 1.25
PTCH1-210ENST00000468211 MTFR2Q6P444 385 aa22.87■■□□□ 1.25
PTCH1-210ENST00000468211 TMIGD1Q6UXZ0 262 aa22.87■■□□□ 1.25
PTCH1-210ENST00000468211 SCUBE1Q8IWY4 988 aa22.87■■□□□ 1.25
PTCH1-210ENST00000468211 ARMC10Q8N2F6 343 aa22.87■■□□□ 1.25
PTCH1-210ENST00000468211 CCT6BQ92526 530 aa22.87■■□□□ 1.25
PTCH1-210ENST00000468211 GAL3ST3Q96A11 431 aa22.87■■□□□ 1.25
PTCH1-210ENST00000468211 ESAMQ96AP7 390 aa22.87■■□□□ 1.25
PTCH1-210ENST00000468211 QRFPRQ96P65 431 aa22.87■■□□□ 1.25
PTCH1-210ENST00000468211 DEFB126Q9BYW3 111 aa22.87■■□□□ 1.25
PTCH1-210ENST00000468211 DERL2Q9GZP9 239 aa22.87■■□□□ 1.25
PTCH1-210ENST00000468211 POPDC3Q9HBV1 291 aa22.87■■□□□ 1.25
PTCH1-210ENST00000468211 PHGDHO43175 533 aaKnown RBP22.86■■□□□ 1.25
PTCH1-210ENST00000468211 ERI3O43414 337 aaKnown RBP22.86■■□□□ 1.25
PTCH1-210ENST00000468211 H2AFYO75367 372 aaKnown RBP22.86■■□□□ 1.25
PTCH1-210ENST00000468211 MYO1DO94832 1006 aa22.86■■□□□ 1.25
PTCH1-210ENST00000468211 GMPRP36959 345 aa22.86■■□□□ 1.25
PTCH1-210ENST00000468211 HLCSP50747 726 aa22.86■■□□□ 1.25
PTCH1-210ENST00000468211 CASP6P55212 293 aa22.86■■□□□ 1.25
PTCH1-210ENST00000468211 FGD2Q7Z6J4 655 aa22.86■■□□□ 1.25
PTCH1-210ENST00000468211 B3GNT7Q8NFL0 401 aa22.86■■□□□ 1.25
PTCH1-210ENST00000468211 NSMCE4AQ9NXX6 385 aa22.86■■□□□ 1.25
PTCH1-210ENST00000468211 MMACHCQ9Y4U1 282 aa22.86■■□□□ 1.25
PTCH1-210ENST00000468211 EML6Q6ZMW3 1958 aa22.86■■□□□ 1.25
PTCH1-210ENST00000468211 TRBV11-1A0A0K0K1C0 115 aa22.85■■□□□ 1.25
PTCH1-210ENST00000468211 SNRPB2P08579 225 aaKnown RBP22.85■■□□□ 1.25
PTCH1-210ENST00000468211 ESRRAP11474 423 aaPredicted RBP22.85■■□□□ 1.25
PTCH1-210ENST00000468211 POU4F1Q01851 419 aa22.85■■□□□ 1.25
PTCH1-210ENST00000468211 OR4D1Q15615 310 aa22.85■■□□□ 1.25
PTCH1-210ENST00000468211 FAM98AQ8NCA5 519 aaKnown RBP22.85■■□□□ 1.25
PTCH1-210ENST00000468211 ARMC2Q8NEN0 867 aa22.85■■□□□ 1.25
PTCH1-210ENST00000468211 FAR2Q96K12 515 aa22.85■■□□□ 1.25
PTCH1-210ENST00000468211 PNO1Q9NRX1 252 aaKnown RBP22.85■■□□□ 1.25
PTCH1-210ENST00000468211 ZNF490Q9ULM2 529 aaPredicted RBP22.85■■□□□ 1.25
PTCH1-210ENST00000468211 PYCARDQ9ULZ3 195 aa22.85■■□□□ 1.25
PTCH1-210ENST00000468211 MEMO1Q9Y316 297 aa22.85■■□□□ 1.25
PTCH1-210ENST00000468211 CSMD2Q7Z408 3487 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 OTOGQ6ZRI0 2925 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 CDK2AP1O14519 115 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 MLYCDO95822 493 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 C1QAP02745 245 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 CCDC166P0CW27 439 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 ZNF24P17028 368 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 CD22P20273 847 aa22.84■■□□□ 1.25
PTCH1-210ENST00000468211 GGT5P36269 586 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms