RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 PTBP2Q9UKA9 531 aaKnown RBP11.18□□□□□ -0.62
RTCB-202ENST00000463455 IGKV3D-11A0A0A0MRZ8 115 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 IGHV3-20A0A0C4DH32 117 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 TCRBV16S1A1N1A0A5B0 115 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 PHGDHO43175 533 aaKnown RBP11.17□□□□□ -0.62
RTCB-202ENST00000463455 CDC123O75794 336 aaPredicted RBP11.17□□□□□ -0.62
RTCB-202ENST00000463455 RASAL1O95294 804 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 S100BP04271 92 aaPredicted RBP11.17□□□□□ -0.62
RTCB-202ENST00000463455 STSP08842 583 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 CASP2P42575 452 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 GDF5P43026 501 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 MAGEA4P43358 317 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 TDGF1P3P51864 188 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 SLC26A5P58743 744 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 MRPS25P82663 173 aaKnown RBP11.17□□□□□ -0.62
RTCB-202ENST00000463455 TGM3Q08188 693 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 TBCCQ15814 346 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 PAGE2BQ5JRK9 111 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 ZDHHC24Q6UX98 284 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 TBC1D1Q86TI0 1168 aaPredicted RBP11.17□□□□□ -0.62
RTCB-202ENST00000463455 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.17□□□□□ -0.62
RTCB-202ENST00000463455 ARMC10Q8N2F6 343 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 SRFBP1Q8NEF9 429 aaKnown RBP11.17□□□□□ -0.62
RTCB-202ENST00000463455 TSLPQ969D9 159 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 UBE2E3Q969T4 207 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 PTCD3Q96EY7 689 aaKnown RBP11.17□□□□□ -0.62
RTCB-202ENST00000463455 FAR2Q96K12 515 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 PTCHD1Q96NR3 888 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 UTP23Q9BRU9 249 aaKnown RBP11.17□□□□□ -0.62
RTCB-202ENST00000463455 TMEM79Q9BSE2 394 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 ROGDIQ9GZN7 287 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 TSPYL1Q9H0U9 437 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 RHBGQ9H310 441 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 NMRAL1Q9HBL8 299 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 PLA2G3Q9NZ20 509 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 NUDT4Q9NZJ9 180 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 RNF112Q9ULX5 631 aa11.17□□□□□ -0.62
RTCB-202ENST00000463455 MRPS33Q9Y291 106 aaKnown RBP11.17□□□□□ -0.62
RTCB-202ENST00000463455 DIDO1Q9BTC0 2240 aaKnown RBP11.17□□□□□ -0.62
RTCB-202ENST00000463455 A0A1B0GUH1 482 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 LRIT2A6NDA9 550 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 ANKDD1BA6NHY2 528 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 NCF1BA6NI72 391 aaPredicted RBP11.16□□□□□ -0.62
RTCB-202ENST00000463455 SAGE2PA6NJ88 616 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 NCF1CA8MVU1 366 aaPredicted RBP11.16□□□□□ -0.62
RTCB-202ENST00000463455 TAPBPO15533 448 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 PIAS1O75925 651 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 MLYCDO95822 493 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 SLC35E2BP0CK96 405 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 NCF1P14598 390 aaPredicted RBP11.16□□□□□ -0.62
RTCB-202ENST00000463455 SERPINB1P30740 379 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 HSD17B7P56937 341 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 RAB8AP61006 207 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 GUCY2DQ02846 1103 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 PDK4Q16654 411 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 ZNF766Q5HY98 468 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 TOR1AIP1Q5JTV8 583 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 C8orf74Q6P047 294 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 TRIM40Q6P9F5 258 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 MAMDC2Q7Z304 686 aaPredicted RBP11.16□□□□□ -0.62
RTCB-202ENST00000463455 CCDC25Q86WR0 208 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 CRLF3Q8IUI8 442 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 RELL1Q8IUW5 271 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 ZNF595Q8IYB9 648 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 BEST3Q8N1M1 668 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 CA13Q8N1Q1 262 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 PPM1NQ8N819 430 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 TMEM178AQ8NBL3 297 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 MDS2Q8NDY4 140 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 OR2L5Q8NG80 312 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 RHEBL1Q8TAI7 183 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 UBTD2Q8WUN7 234 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 MS4A6EQ96DS6 147 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 MAGEB10Q96LZ2 347 aaPredicted RBP11.16□□□□□ -0.62
RTCB-202ENST00000463455 TAAR6Q96RI8 345 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 RBCK1Q9BYM8 510 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 REXO4Q9GZR2 422 aaKnown RBP11.16□□□□□ -0.62
RTCB-202ENST00000463455 KLHL31Q9H511 634 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 TRIM45Q9H8W5 580 aaPredicted RBP11.16□□□□□ -0.62
RTCB-202ENST00000463455 CD274Q9NZQ7 290 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 PPIEQ9UNP9 301 aaKnown RBP11.16□□□□□ -0.62
RTCB-202ENST00000463455 NOTCH2Q04721 2471 aa11.16□□□□□ -0.62
RTCB-202ENST00000463455 A0A087X1B8 175 aa11.15□□□□□ -0.62
RTCB-202ENST00000463455 OR2W5A6NFC9 320 aa11.15□□□□□ -0.62
RTCB-202ENST00000463455 CYSRT1A8MQ03 144 aa11.15□□□□□ -0.62
RTCB-202ENST00000463455 SYCE1LA8MT33 242 aa11.15□□□□□ -0.62
RTCB-202ENST00000463455 A8MUI8 341 aa11.15□□□□□ -0.62
RTCB-202ENST00000463455 C4orf51C9J302 202 aa11.15□□□□□ -0.62
RTCB-202ENST00000463455 CLDN4O14493 209 aa11.15□□□□□ -0.62
RTCB-202ENST00000463455 ERI3O43414 337 aaKnown RBP11.15□□□□□ -0.62
RTCB-202ENST00000463455 B3GALT2O43825 422 aa11.15□□□□□ -0.62
RTCB-202ENST00000463455 B4GALT2O60909 372 aa11.15□□□□□ -0.62
RTCB-202ENST00000463455 KERAO60938 352 aa11.15□□□□□ -0.62
RTCB-202ENST00000463455 TUBB4AP04350 444 aa11.15□□□□□ -0.62
RTCB-202ENST00000463455 LTA4HP09960 611 aaKnown RBP11.15□□□□□ -0.62
RTCB-202ENST00000463455 PHBP35232 272 aa11.15□□□□□ -0.62
RTCB-202ENST00000463455 HSPA7P48741 367 aa11.15□□□□□ -0.62
RTCB-202ENST00000463455 RAB38P57729 211 aa11.15□□□□□ -0.62
RTCB-202ENST00000463455 OLR1P78380 273 aa11.15□□□□□ -0.62
RTCB-202ENST00000463455 TUBA3CQ13748 450 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms