RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 FBXO48Q5FWF7 155 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 MROH9Q5TGP6 573 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 GARNL3Q5VVW2 1013 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 PRAMEF9Q5VWM5 478 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 H3F3CQ6NXT2 135 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 CEP128Q6ZU80 1094 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 NCCRP1Q6ZVX7 275 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 ADCK2Q7Z695 626 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 THOC6Q86W42 341 aaKnown RBP7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 CHERPQ8IWX8 916 aaKnown RBP7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 ACBD4Q8NC06 268 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 ZNF740Q8NDX6 193 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 MDS2Q8NDY4 140 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 DCAKDQ8WVC6 231 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 SLC5A11Q8WWX8 675 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 ATL1Q8WXF7 558 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 ALKBH8Q96BT7 664 aaKnown RBP7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 TM4SF19Q96DZ7 209 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 MRRFQ96E11 262 aaKnown RBP7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 MMABQ96EY8 250 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 HIST1H2AHQ96KK5 128 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 TSNARE1Q96NA8 513 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 GPR78Q96P69 363 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 SIGLEC12Q96PQ1 595 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 ATOH8Q96SQ7 321 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 CYTH2Q99418 400 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 PAFAH2Q99487 392 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 HIST1H2AJQ99878 128 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 HAUS8Q9BT25 410 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 H2AFJQ9BTM1 129 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 TMUB1Q9BVT8 246 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 HES7Q9BYE0 225 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 TRIM54Q9BYV2 358 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 VN1R1Q9GZP7 353 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 AICDAQ9GZX7 198 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 DRC3Q9H069 523 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 TSPYL1Q9H0U9 437 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 CHST11Q9NPF2 352 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 SNX15Q9NRS6 342 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 TINAGQ9UJW2 476 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 CDC14AQ9UNH5 594 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 SLC22A14Q9Y267 594 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 ZNF835Q9Y2P0 537 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 ASB1Q9Y576 335 aa7.46□□□□□ -1.22
CDC42BPA-210ENST00000462553 NSD1Q96L73 2696 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 ASPDHA6ND91 283 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 NCF1BA6NI72 391 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 NCF1CA8MVU1 366 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 C4orf51C9J302 202 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 WFS1O76024 890 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 CRYABP02511 175 aaKnown RBP7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 C2P06681 752 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 ANXA5P08758 320 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 C8orf89P0DMQ9 161 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 MTHFD2P13995 350 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 NCF1P14598 390 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 COX6B1P14854 86 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 EPORP19235 508 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 TFEBP19484 476 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 AGAP20933 346 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 CXCR2P25025 360 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 CRABP2P29373 138 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 GGT5P36269 586 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 GDF5P43026 501 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 KIR3DL1P43629 444 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 HSPA7P48741 367 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 HNMTP50135 292 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 SERPINB8P50452 374 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 ST13P50502 369 aaKnown RBP7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 RPS15AP62244 130 aaKnown RBP7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 FAM53BQ14153 422 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 UAP1Q16222 522 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 ZNF766Q5HY98 468 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 FCRLBQ6BAA4 426 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 PLAG1Q6DJT9 500 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 TMEM214Q6NUQ4 689 aaKnown RBP7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 MTFR2Q6P444 385 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 Q6ZPB1 254 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 FRA10AC1Q70Z53 315 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 TMPRSS11BQ86T26 416 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 ISCA2Q86U28 154 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 GPSM1Q86YR5 675 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 SIAH3Q8IW03 269 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 IFT20Q8IY31 132 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 BEST3Q8N1M1 668 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 PLD6Q8N2A8 252 aaKnown RBP7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 ANKRD53Q8N9V6 530 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 MFSD9Q8NBP5 474 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 OR9A4Q8NGU2 314 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 UHMK1Q8TAS1 419 aaKnown RBP7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 ADAMTS18Q8TE60 1221 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 UBTD2Q8WUN7 234 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 KCTD4Q8WVF5 259 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 NXNL1Q96CM4 212 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 THAP11Q96EK4 314 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 SCMH1Q96GD3 660 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 FRMD6Q96NE9 622 aa7.45□□□□□ -1.22
CDC42BPA-210ENST00000462553 EGFL8Q99944 293 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms