RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CLGNO14967 610 aa17.76■□□□□ 0.43
VARS-220ENST00000461874 CLEC3AO75596 197 aa17.76■□□□□ 0.43
VARS-220ENST00000461874 FAM155BO75949 473 aa17.76■□□□□ 0.43
VARS-220ENST00000461874 MST1P26927 711 aa17.76■□□□□ 0.43
VARS-220ENST00000461874 HNRNPH1P31943 449 aaKnown RBP17.76■□□□□ 0.43
VARS-220ENST00000461874 STX2P32856 288 aa17.76■□□□□ 0.43
VARS-220ENST00000461874 KCNC1P48547 511 aa17.76■□□□□ 0.43
VARS-220ENST00000461874 KCNK10P57789 538 aa17.76■□□□□ 0.43
VARS-220ENST00000461874 RUNX2Q13950 521 aa17.76■□□□□ 0.43
VARS-220ENST00000461874 PDPRQ8NCN5 879 aa17.76■□□□□ 0.43
VARS-220ENST00000461874 ARMC2Q8NEN0 867 aa17.76■□□□□ 0.43
VARS-220ENST00000461874 FBF1Q8TES7 1133 aa17.76■□□□□ 0.43
VARS-220ENST00000461874 CCT6BQ92526 530 aa17.76■□□□□ 0.43
VARS-220ENST00000461874 WDR34Q96EX3 536 aa17.76■□□□□ 0.43
VARS-220ENST00000461874 FAR2Q96K12 515 aa17.76■□□□□ 0.43
VARS-220ENST00000461874 SIGLEC12Q96PQ1 595 aa17.76■□□□□ 0.43
VARS-220ENST00000461874 NPLQ9BXD5 320 aaPredicted RBP17.76■□□□□ 0.43
VARS-220ENST00000461874 NECTIN3Q9NQS3 549 aa17.76■□□□□ 0.43
VARS-220ENST00000461874 CD274Q9NZQ7 290 aa17.76■□□□□ 0.43
VARS-220ENST00000461874 A0A0G2JN53 185 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 A0A1B0GUH1 482 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 ANKDD1BA6NHY2 528 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 SAGE2PA6NJ88 616 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 GABRR3A8MPY1 467 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 ERI3O43414 337 aaKnown RBP17.75■□□□□ 0.43
VARS-220ENST00000461874 TBX6O95947 436 aaPredicted RBP17.75■□□□□ 0.43
VARS-220ENST00000461874 SLC35E2BP0CK96 405 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 GMPRP36959 345 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 ST13P50502 369 aaKnown RBP17.75■□□□□ 0.43
VARS-220ENST00000461874 PER3P56645 1201 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 GUCY2DQ02846 1103 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 SRSF11Q05519 484 aaKnown RBP17.75■□□□□ 0.43
VARS-220ENST00000461874 OR1C1Q15619 314 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 PDK4Q16654 411 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 ADPRMQ3LIE5 342 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 XKR6Q5GH73 641 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 GFRALQ6UXV0 394 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 VN1R5Q7Z5H4 357 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 CMC1Q7Z7K0 106 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 RPS19BP1Q86WX3 136 aaKnown RBP17.75■□□□□ 0.43
VARS-220ENST00000461874 KIF2BQ8N4N8 673 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 SNX31Q8N9S9 440 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 NFAM1Q8NET5 270 aaPredicted RBP17.75■□□□□ 0.43
VARS-220ENST00000461874 STAG3L4Q8TBR4 150 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 PTCD3Q96EY7 689 aaKnown RBP17.75■□□□□ 0.43
VARS-220ENST00000461874 QRFPRQ96P65 431 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 CDCP1Q9H5V8 836 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 ANKRD10Q9NXR5 420 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 ZNF490Q9ULM2 529 aaPredicted RBP17.75■□□□□ 0.43
VARS-220ENST00000461874 RNF112Q9ULX5 631 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 MMACHCQ9Y4U1 282 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 CENPEQ02224 2701 aa17.75■□□□□ 0.43
VARS-220ENST00000461874 CDK2AP1O14519 115 aa17.74■□□□□ 0.43
VARS-220ENST00000461874 COL8A1P27658 744 aa17.74■□□□□ 0.43
VARS-220ENST00000461874 CRABP2P29373 138 aa17.74■□□□□ 0.43
VARS-220ENST00000461874 HPDP32754 393 aaPredicted RBP17.74■□□□□ 0.43
VARS-220ENST00000461874 PMP22Q01453 160 aa17.74■□□□□ 0.43
VARS-220ENST00000461874 DLG1Q12959 904 aa17.74■□□□□ 0.43
VARS-220ENST00000461874 NAB1Q13506 487 aa17.74■□□□□ 0.43
VARS-220ENST00000461874 DOC2AQ14183 400 aa17.74■□□□□ 0.43
VARS-220ENST00000461874 SPINK14Q6IE38 97 aa17.74■□□□□ 0.43
VARS-220ENST00000461874 RAPH1Q70E73 1250 aa17.74■□□□□ 0.43
VARS-220ENST00000461874 ISCA2Q86U28 154 aa17.74■□□□□ 0.43
VARS-220ENST00000461874 OR2L5Q8NG80 312 aa17.74■□□□□ 0.43
VARS-220ENST00000461874 RELTQ969Z4 430 aa17.74■□□□□ 0.43
VARS-220ENST00000461874 SCMH1Q96GD3 660 aa17.74■□□□□ 0.43
VARS-220ENST00000461874 EFCAB11Q9BUY7 163 aa17.74■□□□□ 0.43
VARS-220ENST00000461874 REXO4Q9GZR2 422 aaKnown RBP17.74■□□□□ 0.43
VARS-220ENST00000461874 ALG9Q9H6U8 611 aa17.74■□□□□ 0.43
VARS-220ENST00000461874 NMRAL1Q9HBL8 299 aa17.74■□□□□ 0.43
VARS-220ENST00000461874 TEX15Q9BXT5 2789 aa17.74■□□□□ 0.43
VARS-220ENST00000461874 A0A088AWK7 358 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 B3GALT2O43825 422 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 CCNT2O60583 730 aaKnown RBP17.73■□□□□ 0.43
VARS-220ENST00000461874 UNC5CO95185 931 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 S100BP04271 92 aaPredicted RBP17.73■□□□□ 0.43
VARS-220ENST00000461874 CD46P15529 392 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 EPORP19235 508 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 CD22P20273 847 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 ZNF10P21506 573 aaPredicted RBP17.73■□□□□ 0.43
VARS-220ENST00000461874 PLA2G16P53816 162 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 SLC7A5Q01650 507 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 OC90Q02509 493 aaPredicted RBP17.73■□□□□ 0.43
VARS-220ENST00000461874 SLMAPQ14BN4 828 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 EFTUD2Q15029 972 aaKnown RBP eCLIP17.73■□□□□ 0.434e-8■■■■■ 49.7
VARS-220ENST00000461874 TBCCQ15814 346 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 C1QL3Q5VWW1 255 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 ADNP2Q6IQ32 1131 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 LRRC70Q7Z2Q7 622 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 FJX1Q86VR8 437 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 SCUBE1Q8IWY4 988 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 HORMAD2Q8N7B1 307 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 EXT2Q93063 718 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 HES7Q9BYE0 225 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 CD244Q9BZW8 370 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 KLHL1Q9NR64 748 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 IGSF5Q9NSI5 407 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 SEC14L3Q9UDX4 400 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 ASB1Q9Y576 335 aa17.73■□□□□ 0.43
VARS-220ENST00000461874 ESYT3A0FGR9 886 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms