RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 DUSP5Q16690 384 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 CST9LP1Q5W188 147 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 TRAT1Q6PIZ9 186 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 PP632Q6XCG6 107 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 ZNF595Q8IYB9 648 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 NAT8LQ8N9F0 302 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 SPC24Q8NBT2 197 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 OR5M9Q8NGP3 310 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 TEKT4Q8WW24 435 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 RSPH1Q8WYR4 309 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 CASP10Q92851 521 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 SNX21Q969T3 373 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 C11orf52Q96A22 123 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 PGM2Q96G03 612 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 CCDC114Q96M63 670 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 TAAR6Q96RI8 345 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 CCDC28BQ9BUN5 200 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 MMADHCQ9H3L0 296 aaPredicted RBP1.87□□□□□ -2.11
SYPL1-203ENST00000460770 ST6GALNAC4Q9H4F1 302 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 COPS7BQ9H9Q2 264 aaPredicted RBP1.87□□□□□ -2.11
SYPL1-203ENST00000460770 MYNNQ9NPC7 610 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 EXOC1Q9NV70 894 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 ANAPC2Q9UJX6 822 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 MRPL11Q9Y3B7 192 aaKnown RBP1.87□□□□□ -2.11
SYPL1-203ENST00000460770 MRPS18CQ9Y3D5 142 aaKnown RBP1.87□□□□□ -2.11
SYPL1-203ENST00000460770 A0A087WZ39 114 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 BCLAF3A2AJT9 711 aaKnown RBP1.86□□□□□ -2.11
SYPL1-203ENST00000460770 GTPBP10A4D1E9 387 aaKnown RBP1.86□□□□□ -2.11
SYPL1-203ENST00000460770 CASTOR2A6NHX0 329 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 WDR46O15213 610 aaKnown RBP1.86□□□□□ -2.11
SYPL1-203ENST00000460770 GOSR1O95249 250 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 PENKP01210 267 aaPredicted RBP1.86□□□□□ -2.11
SYPL1-203ENST00000460770 IGKV3-11P04433 115 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 FYNP06241 537 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 YES1P07947 543 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 ERCC2P18074 760 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 FCGR2BP31994 310 aaPredicted RBP1.86□□□□□ -2.11
SYPL1-203ENST00000460770 FCGR2CP31995 323 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 RPL9P32969 192 aaKnown RBP1.86□□□□□ -2.11
SYPL1-203ENST00000460770 RAB28P51157 221 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 CRYBA2P53672 197 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 ABCE1P61221 599 aaKnown RBP1.86□□□□□ -2.11
SYPL1-203ENST00000460770 YWHAHQ04917 246 aaPredicted RBP1.86□□□□□ -2.11
SYPL1-203ENST00000460770 SCN1BQ07699 218 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 ILF2Q12905 390 aaKnown RBP1.86□□□□□ -2.11
SYPL1-203ENST00000460770 RALGDSQ12967 914 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 PTK6Q13882 451 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 MLF2Q15773 248 aaPredicted RBP1.86□□□□□ -2.11
SYPL1-203ENST00000460770 TMEM44Q2T9K0 475 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 TIMM50Q3ZCQ8 353 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 MPP7Q5T2T1 576 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 C6orf163Q5TEZ5 329 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 LEMD1Q68G75 181 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 KRT39Q6A163 491 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 CYB5D1Q6P9G0 228 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 C11orf88Q6PI97 169 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 NHLRC1Q6VVB1 395 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 PIWIL3Q7Z3Z3 882 aaKnown RBP1.86□□□□□ -2.11
SYPL1-203ENST00000460770 CAMKMTQ7Z624 323 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 IQCHQ86VS3 1027 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 UNC45BQ8IWX7 931 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 CCAR2Q8N163 923 aaKnown RBP1.86□□□□□ -2.11
SYPL1-203ENST00000460770 TC2NQ8N9U0 490 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 IQUBQ8NA54 791 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 CFAP61Q8NHU2 1237 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 GRK7Q8WTQ7 553 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 SSC4DQ8WTU2 575 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 ITLN1Q8WWA0 313 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 PROX1Q92786 737 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 FAM162AQ96A26 154 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 CCDC47Q96A33 483 aaKnown RBP1.86□□□□□ -2.11
SYPL1-203ENST00000460770 TBC1D31Q96DN5 1066 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 CCDC43Q96MW1 224 aaKnown RBP1.86□□□□□ -2.11
SYPL1-203ENST00000460770 KLHL5Q96PQ7 755 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 FERMT1Q9BQL6 677 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 ACAT2Q9BWD1 397 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 GOLPH3LQ9H4A5 285 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 ACTL8Q9H568 366 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 NOL11Q9H8H0 719 aaKnown RBP1.86□□□□□ -2.11
SYPL1-203ENST00000460770 ANKZF1Q9H8Y5 726 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 GDE1Q9NZC3 331 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 DNAJB9Q9UBS3 223 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 FBXL4Q9UKA2 621 aa1.86□□□□□ -2.11
SYPL1-203ENST00000460770 COL4A4P53420 1690 aaPredicted RBP1.86□□□□□ -2.11
SYPL1-203ENST00000460770 TCRBV21S2A2A0A5A6 115 aa1.85□□□□□ -2.11
SYPL1-203ENST00000460770 A4D1N5 150 aa1.85□□□□□ -2.11
SYPL1-203ENST00000460770 RPL37AP8A6NKH3 93 aa1.85□□□□□ -2.11
SYPL1-203ENST00000460770 A8MVM7 634 aa1.85□□□□□ -2.11
SYPL1-203ENST00000460770 DDX39AO00148 427 aaKnown RBP1.85□□□□□ -2.11
SYPL1-203ENST00000460770 RTCAO00442 366 aaKnown RBP1.85□□□□□ -2.11
SYPL1-203ENST00000460770 SAP30O75446 220 aa1.85□□□□□ -2.11
SYPL1-203ENST00000460770 RECQL5O94762 991 aaPredicted RBP1.85□□□□□ -2.11
SYPL1-203ENST00000460770 MT-ND3P03897 115 aa1.85□□□□□ -2.11
SYPL1-203ENST00000460770 PTMAP06454 111 aaKnown RBP1.85□□□□□ -2.11
SYPL1-203ENST00000460770 STMN1P16949 149 aa1.85□□□□□ -2.11
SYPL1-203ENST00000460770 GPX3P22352 226 aa1.85□□□□□ -2.11
SYPL1-203ENST00000460770 HSPA4P34932 840 aa1.85□□□□□ -2.11
SYPL1-203ENST00000460770 PCGF2P35227 344 aa1.85□□□□□ -2.11
SYPL1-203ENST00000460770 SPRP35270 261 aaPredicted RBP1.85□□□□□ -2.11
SYPL1-203ENST00000460770 SLC1A4P43007 532 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms