RNA–Protein interactions for RNA: ENST00000459697.1

RABGGTB-203, Transcript of Rab geranylgeranyltransferase subunit beta, humanhuman

TSL 2

Gene RABGGTB, Length 1,177 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTB-203ENST00000459697 WNT3P56703 355 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 AP2B1P63010 937 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 INCA1Q0VD86 236 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 SCGB2A2Q13296 93 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 NECTIN1Q15223 517 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 IL17AQ16552 155 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 KPRPQ5T749 579 aaPredicted RBP4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 C20orf194Q5TEA3 1177 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 SYPL2Q5VXT5 272 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 BRAT1Q6PJG6 821 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 ZNF704Q6ZNC4 412 aaPredicted RBP4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 LUZP2Q86TE4 346 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 OOSP2Q86WS3 158 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 CNPY4Q8N129 248 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 ZNF441Q8N8Z8 693 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 UBA3Q8TBC4 463 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 STT3BQ8TCJ2 826 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 GPT2Q8TD30 523 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 TSPEARQ8WU66 669 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 CASKIN2Q8WXE0 1202 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 GTF3AQ92664 365 aaKnown RBP4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 C3orf49Q96BT1 292 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 ZBTB9Q96C00 473 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 CDK5RAP3Q96JB5 506 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 CAPZA3Q96KX2 299 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 ZNF354BQ96LW1 612 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 MED18Q9BUE0 208 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 MIS12Q9H081 205 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 IFT22Q9H7X7 185 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 NOD2Q9HC29 1040 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 MPP6Q9NZW5 540 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 TBC1D7Q9P0N9 293 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 TRIM10Q9UDY6 481 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 C3orf18Q9UK00 162 aa4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 FBXO2Q9UK22 296 aaPredicted RBP4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 NXT1Q9UKK6 140 aaKnown RBP4.28□□□□□ -1.72
RABGGTB-203ENST00000459697 IGHV1-45A0A0A0MS14 117 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 ILVBLA1L0T0 632 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 TSPAN11A1L157 253 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 OR6C74A6NCV1 312 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 HS3ST1O14792 307 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 SRGAP2O75044 1071 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 TMCC1O94876 653 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 GCNT3O95395 438 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 TRUB2O95900 331 aaKnown RBP4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 PLAUP00749 431 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 PIM1P11309 404 aaPredicted RBP4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 ST6GAL1P15907 406 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 CXCR2P25025 360 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 CCR1P32246 355 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 CARSP49589 748 aaKnown RBP4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 CASP4P49662 377 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 ZNF136P52737 540 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 DRG2P55039 364 aaKnown RBP4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 RHOAP61586 193 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 KLC1Q07866 573 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 CYP24A1Q07973 514 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 BST2Q10589 180 aaKnown RBP4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 FAPQ12884 760 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 GBX1Q14549 363 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 GRM3Q14832 879 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 PSMD6Q15008 389 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 SNRNP35Q16560 246 aaKnown RBP4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 MTX3Q5HYI7 312 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 WLSQ5T9L3 541 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 ICE2Q659A1 982 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 CPLX2Q6PUV4 134 aaKnown RBP4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 CDHR3Q6ZTQ4 885 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 COX15Q7KZN9 410 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 DPPA4Q7L190 304 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 NLRP9Q7RTR0 991 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 AMIGO2Q86SJ2 522 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 ZNF611Q8N823 705 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 CCDC89Q8N998 374 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 PPHLN1Q8NEY8 458 aaKnown RBP4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 TBC1D15Q8TC07 691 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 HCAR2Q8TDS4 363 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 IRGQQ8WZA9 623 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 DTD2Q96FN9 168 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 ZC3HAV1LQ96H79 300 aaKnown RBP4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 LRGUKQ96M69 825 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 WFIKKN1Q96NZ8 548 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 TBCBQ99426 244 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 RBM4BQ9BQ04 359 aaKnown RBP4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 LSG1Q9H089 658 aaKnown RBP4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 FAM204AQ9H8W3 233 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 CD84Q9UIB8 345 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 SCOCQ9UIL1 159 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 TSPAN16Q9UKR8 245 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 WIF1Q9Y5W5 379 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 MORC2Q9Y6X9 1032 aaPredicted RBP4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 ARHGAP21Q5T5U3 1957 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 KIAA1549Q9HCM3 1950 aa4.27□□□□□ -1.73
RABGGTB-203ENST00000459697 DOCK4Q8N1I0 1966 aa4.26□□□□□ -1.73
RABGGTB-203ENST00000459697 SLC5A10A0PJK1 596 aa4.26□□□□□ -1.73
RABGGTB-203ENST00000459697 CDHR4A6H8M9 788 aa4.26□□□□□ -1.73
RABGGTB-203ENST00000459697 TIMM23O14925 209 aa4.26□□□□□ -1.73
RABGGTB-203ENST00000459697 KIAA0391O15091 583 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms