RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 TBC1D19Q8N5T2 526 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 B3GNT7Q8NFL0 401 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 ASB5Q8WWX0 329 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 SLC5A11Q8WWX8 675 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 FBXL8Q96CD0 374 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 TSNARE1Q96NA8 513 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 ZNF407Q9C0G0 2248 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 AKAP6Q13023 2319 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 FAM90A27PA6NNH2 459 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 PSMD12O00232 456 aaPredicted RBP11.55□□□□□ -0.56
TRA2B-206ENST00000456380 MYO1DO94832 1006 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 GUCA1CO95843 209 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 MSX1P28360 303 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 CLCN2P51788 898 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 IL2P60568 153 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 REEP5Q00765 189 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 KRTAP21-3Q3LHN1 58 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 ARHGAP11AQ6P4F7 1023 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 C16orf47Q6ZP98 133 aaPredicted RBP11.55□□□□□ -0.56
TRA2B-206ENST00000456380 CCDC71Q8IV32 467 aaPredicted RBP11.55□□□□□ -0.56
TRA2B-206ENST00000456380 DMRTC2Q8IXT2 367 aaPredicted RBP11.55□□□□□ -0.56
TRA2B-206ENST00000456380 CA13Q8N1Q1 262 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 TMEM156Q8N614 296 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 TRPV3Q8NET8 790 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 TRIM58Q8NG06 486 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 RND1Q92730 232 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 PDLIM2Q96JY6 352 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 DEFB127Q9H1M4 99 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 TP63Q9H3D4 680 aaPredicted RBP11.55□□□□□ -0.56
TRA2B-206ENST00000456380 DEPPQ9NTK1 212 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 FBXW2Q9UKT8 454 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 IKZF3Q9UKT9 509 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 DNAJC13O75165 2243 aa11.55□□□□□ -0.56
TRA2B-206ENST00000456380 ACANP16112 2415 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 PINLYPA6NC86 204 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 URADA6NGE7 173 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 TMEM200CA6NKL6 621 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 USP27XA6NNY8 438 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 FOXO6A8MYZ6 492 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 PRKNO60260 465 aaPredicted RBP11.54□□□□□ -0.56
TRA2B-206ENST00000456380 DIAPH2O60879 1101 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 CD1EP15812 388 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 PGAM1P18669 254 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 PPP2R1BP30154 601 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 GPR143P51810 404 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 PMPCAQ10713 525 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 CCDC137Q6PK04 289 aaKnown RBP11.54□□□□□ -0.56
TRA2B-206ENST00000456380 CNTN4Q8IWV2 1026 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 ARMC2Q8NEN0 867 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 CREB3L4Q8TEY5 395 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 ATL1Q8WXF7 558 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 MS4A14Q96JA4 679 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 SEC16BQ96JE7 1060 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 TRIM54Q9BYV2 358 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 KCNJ16Q9NPI9 418 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 KCMF1Q9P0J7 381 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 SLC17A6Q9P2U8 582 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 PPIEQ9UNP9 301 aaKnown RBP11.54□□□□□ -0.56
TRA2B-206ENST00000456380 CLDN16Q9Y5I7 305 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 HCFC1P51610 2035 aa11.54□□□□□ -0.56
TRA2B-206ENST00000456380 PABPN1LA6NDY0 278 aaKnown RBP11.53□□□□□ -0.56
TRA2B-206ENST00000456380 TGFBR3LH3BV60 316 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 BANF1O75531 89 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 SERPINA6P08185 405 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 HOXD4P09016 255 aaPredicted RBP11.53□□□□□ -0.56
TRA2B-206ENST00000456380 CCDC175P0C221 793 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 SSR4P51571 173 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 ART1P52961 327 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 NUP107P57740 925 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 PDAP1Q13442 181 aaKnown RBP11.53□□□□□ -0.56
TRA2B-206ENST00000456380 RUNX2Q13950 521 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 RBBP5Q15291 538 aaKnown RBP11.53□□□□□ -0.56
TRA2B-206ENST00000456380 TERF2Q15554 542 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 CYP1B1Q16678 543 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 XKR6Q5GH73 641 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 TOR1AIP1Q5JTV8 583 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 NXPE4Q6UWF7 544 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 THOC6Q86W42 341 aaKnown RBP11.53□□□□□ -0.56
TRA2B-206ENST00000456380 SCUBE1Q8IWY4 988 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 RASGEF1CQ8N431 466 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 NRGNQ92686 78 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 NCLNQ969V3 563 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 LIN28AQ9H9Z2 209 aaKnown RBP11.53□□□□□ -0.56
TRA2B-206ENST00000456380 PELI2Q9HAT8 420 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 TIMMDC1Q9NPL8 285 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 PNO1Q9NRX1 252 aaKnown RBP11.53□□□□□ -0.56
TRA2B-206ENST00000456380 SLC22A14Q9Y267 594 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 YARS2Q9Y2Z4 477 aaKnown RBP11.53□□□□□ -0.56
TRA2B-206ENST00000456380 MMACHCQ9Y4U1 282 aa11.53□□□□□ -0.56
TRA2B-206ENST00000456380 HRNRQ86YZ3 2850 aaPredicted RBP11.53□□□□□ -0.56
TRA2B-206ENST00000456380 ANKHD1Q8IWZ3 2542 aaKnown RBP11.53□□□□□ -0.56
TRA2B-206ENST00000456380 PRRC2AP48634 2157 aaKnown RBP11.53□□□□□ -0.56
TRA2B-206ENST00000456380 NPIPA2E9PIF3 369 aa11.52□□□□□ -0.56
TRA2B-206ENST00000456380 NPIPA3F8WFD2 350 aa11.52□□□□□ -0.56
TRA2B-206ENST00000456380 TUBB4AP04350 444 aa11.52□□□□□ -0.56
TRA2B-206ENST00000456380 HNRNPFP52597 415 aaKnown RBP11.52□□□□□ -0.56
TRA2B-206ENST00000456380 PPIAP62937 165 aaKnown RBP11.52□□□□□ -0.56
TRA2B-206ENST00000456380 BTN3A2P78410 334 aa11.52□□□□□ -0.56
TRA2B-206ENST00000456380 PPP1R3AQ16821 1122 aa11.52□□□□□ -0.56
TRA2B-206ENST00000456380 GXYLT1Q4G148 440 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms