RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 MAD2L1BPQ15013 274 aaPredicted RBP14.41□□□□□ -0.1
LDLR-202ENST00000455727 IFI44LQ53G44 452 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 DEPDC1Q5TB30 811 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 FAM124AQ86V42 546 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 SLC30A8Q8IWU4 369 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 ABHD11Q8NFV4 315 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 TBC1D15Q8TC07 691 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 BCL7BQ9BQE9 202 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 AIF1LQ9BQI0 150 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 NT5DC2Q9H857 520 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 THSD1Q9NS62 852 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 SPATA7Q9P0W8 599 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 ANKDD1BA6NHY2 528 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 ZNF99A8MXY4 864 aaPredicted RBP14.41□□□□□ -0.1
LDLR-202ENST00000455727 XPNPEP2O43895 674 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 ACVR2AP27037 513 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 TEAD1P28347 426 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 DRD3P35462 400 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 EIF2DP41214 584 aaKnown RBP14.41□□□□□ -0.1
LDLR-202ENST00000455727 PXNP49023 591 aaPredicted RBP14.41□□□□□ -0.1
LDLR-202ENST00000455727 ENTPD1P49961 510 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 CSNK2BP67870 215 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 PIGFQ07326 219 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 RUNX3Q13761 415 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 SLC5A12Q1EHB4 618 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 WSCD2Q2TBF2 565 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 PROX2Q3B8N5 592 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 KHDRBS2Q5VWX1 349 aaKnown RBP14.41□□□□□ -0.1
LDLR-202ENST00000455727 ANKRD13BQ86YJ7 626 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 SPPL2AQ8TCT8 520 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 HRASLS5Q96KN8 279 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 CSF3RQ99062 836 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 MENTQ9BUN1 341 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 FUNDC2Q9BWH2 189 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 TEX101Q9BY14 249 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 SLC6A16Q9GZN6 736 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 CCNB1IP1Q9NPC3 277 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 MIEF1Q9NQG6 463 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 TAAR2Q9P1P5 351 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 PLAGL1Q9UM63 463 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 TDRKHQ9Y2W6 561 aaKnown RBP14.41□□□□□ -0.1
LDLR-202ENST00000455727 LYVE1Q9Y5Y7 322 aa14.41□□□□□ -0.1
LDLR-202ENST00000455727 IGLON5A6NGN9 336 aa14.4□□□□□ -0.1
LDLR-202ENST00000455727 A8MVJ9 347 aa14.4□□□□□ -0.1
LDLR-202ENST00000455727 KMOO15229 486 aa14.4□□□□□ -0.1
LDLR-202ENST00000455727 TBX6O95947 436 aaPredicted RBP14.4□□□□□ -0.1
LDLR-202ENST00000455727 ITGA2P17301 1181 aa14.4□□□□□ -0.1
LDLR-202ENST00000455727 CD247P20963 164 aa14.4□□□□□ -0.1
LDLR-202ENST00000455727 UQCRC2P22695 453 aa14.4□□□□□ -0.1
LDLR-202ENST00000455727 GJA4P35212 333 aa14.4□□□□□ -0.1
LDLR-202ENST00000455727 CHI3L1P36222 383 aaPredicted RBP14.4□□□□□ -0.1
LDLR-202ENST00000455727 RPP38P78345 283 aaKnown RBP14.4□□□□□ -0.1
LDLR-202ENST00000455727 CDK6Q00534 326 aa14.4□□□□□ -0.1
LDLR-202ENST00000455727 PRSS53Q2L4Q9 553 aa14.4□□□□□ -0.1
LDLR-202ENST00000455727 GIPC3Q8TF64 312 aa14.4□□□□□ -0.1
LDLR-202ENST00000455727 FAR1Q8WVX9 515 aa14.4□□□□□ -0.1
LDLR-202ENST00000455727 SMPDL3AQ92484 453 aa14.4□□□□□ -0.1
LDLR-202ENST00000455727 TAMM41Q96BW9 452 aa14.4□□□□□ -0.1
LDLR-202ENST00000455727 LGR4Q9BXB1 951 aa14.4□□□□□ -0.1
LDLR-202ENST00000455727 MS4A8Q9BY19 250 aa14.4□□□□□ -0.1
LDLR-202ENST00000455727 EPS8L2Q9H6S3 715 aa14.4□□□□□ -0.1
LDLR-202ENST00000455727 TNFRSF11BO00300 401 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 PLPP1O14494 284 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 NDUFS2O75306 463 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 KAT7O95251 611 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 BCL10O95999 233 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 PCCBP05166 539 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 CA3P07451 260 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 INHBBP09529 407 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 ARAFP10398 606 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 ZNF182P17025 639 aaPredicted RBP14.4□□□□□ -0.11
LDLR-202ENST00000455727 DDX5P17844 614 aaKnown RBP14.4□□□□□ -0.11
LDLR-202ENST00000455727 DDCP20711 480 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 FMO3P31513 532 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 GSTM5P46439 218 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 CCR8P51685 355 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 GP2P55259 537 aaKnown RBP14.4□□□□□ -0.11
LDLR-202ENST00000455727 PCBP3P57721 371 aaKnown RBP14.4□□□□□ -0.11
LDLR-202ENST00000455727 TAS2R38P59533 333 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 ERVK-21P61565 698 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 NPTX1Q15818 432 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 MOGQ16653 247 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 ZNF829Q3KNS6 432 aaPredicted RBP14.4□□□□□ -0.11
LDLR-202ENST00000455727 TANGO2Q6ICL3 276 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 VITQ6UXI7 678 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 PAGE2Q7Z2X7 111 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 RNF130Q86XS8 419 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 DRAXINQ8NBI3 349 aaPredicted RBP14.4□□□□□ -0.11
LDLR-202ENST00000455727 NFKBIDQ8NI38 313 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 TANKQ92844 425 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 ZNF300Q96RE9 604 aaPredicted RBP14.4□□□□□ -0.11
LDLR-202ENST00000455727 ZNF717Q9BY31 904 aaPredicted RBP14.4□□□□□ -0.11
LDLR-202ENST00000455727 CCDC90BQ9GZT6 254 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 WARS2Q9UGM6 360 aaKnown RBP14.4□□□□□ -0.11
LDLR-202ENST00000455727 TAC3Q9UHF0 121 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 ENPP5Q9UJA9 477 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 ACSL5Q9ULC5 683 aa14.4□□□□□ -0.11
LDLR-202ENST00000455727 PLXND1Q9Y4D7 1925 aa14.39□□□□□ -0.11
LDLR-202ENST00000455727 INMTO95050 263 aa14.39□□□□□ -0.11
LDLR-202ENST00000455727 HTR1BP28222 390 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms