RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 SNX31Q8N9S9 440 aa16.8■□□□□ 0.28
COPS7A-202ENST00000455113 PPP4R1Q8TF05 950 aa16.8■□□□□ 0.28
COPS7A-202ENST00000455113 METTL21AQ8WXB1 218 aa16.8■□□□□ 0.28
COPS7A-202ENST00000455113 FBXL4Q9UKA2 621 aa16.8■□□□□ 0.28
COPS7A-202ENST00000455113 PCTPQ9UKL6 214 aa16.8■□□□□ 0.28
COPS7A-202ENST00000455113 MKL2Q9ULH7 1088 aa16.8■□□□□ 0.28
COPS7A-202ENST00000455113 SCN3AQ9NY46 2000 aa16.8■□□□□ 0.28
COPS7A-202ENST00000455113 E2F3O00716 465 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 SOCS6O14544 535 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 FFAR3O14843 346 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 GPR42O15529 346 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 DPM1O60762 260 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 GNGT1P63211 74 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 MAT1AQ00266 395 aaKnown RBP16.79■□□□□ 0.28
COPS7A-202ENST00000455113 RAPSNQ13702 412 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 SYT16Q17RD7 645 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 ATG9BQ674R7 924 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 FRMD7Q6ZUT3 714 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 ZNF740Q8NDX6 193 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 OR51Q1Q8NH59 317 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 TM9SF4Q92544 642 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 CNDP1Q96KN2 507 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 NSUN5Q96P11 429 aaKnown RBP16.79■□□□□ 0.28
COPS7A-202ENST00000455113 GSTO2Q9H4Y5 243 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 ZNF395Q9H8N7 513 aaPredicted RBP16.79■□□□□ 0.28
COPS7A-202ENST00000455113 OPTCQ9UBM4 332 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 MRPS2Q9Y399 296 aaKnown RBP16.79■□□□□ 0.28
COPS7A-202ENST00000455113 NAALAD2Q9Y3Q0 740 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 BOD1L1Q8NFC6 3051 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 NUP210LQ5VU65 1888 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 TMEM114B3SHH9 223 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 TCP11X1B4DZS4 312 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 K7EM74 188 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 SGK494L7N484 410 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 ITM2AO43736 263 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 NPHS1O60500 1241 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 VARSP26640 1264 aaKnown RBP16.79■□□□□ 0.28
COPS7A-202ENST00000455113 GSTM2P28161 218 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 ARRB2P32121 409 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 CASRP41180 1078 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 CDH13P55290 713 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 RCN2Q14257 317 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 MYBPC3Q14896 1274 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 HIST2H2ACQ16777 129 aaPredicted RBP16.79■□□□□ 0.28
COPS7A-202ENST00000455113 MINDY4Q4G0A6 757 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 VWA5B1Q5TIE3 1220 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 HIST2H2AA3Q6FI13 130 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 METTL2BQ6P1Q9 378 aaKnown RBP16.79■□□□□ 0.28
COPS7A-202ENST00000455113 KIRREL2Q6UWL6 708 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 TMIGD1Q6UXZ0 262 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 NT5CQ8TCD5 201 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 ZNF483Q8TF39 744 aaPredicted RBP16.79■□□□□ 0.28
COPS7A-202ENST00000455113 NUDT9Q9BW91 350 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 C20orf27Q9GZN8 174 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 PITHD1Q9GZP4 211 aaPredicted RBP16.79■□□□□ 0.28
COPS7A-202ENST00000455113 C5AR2Q9P296 337 aa16.79■□□□□ 0.28
COPS7A-202ENST00000455113 SPTA1P02549 2419 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 ANKDD1BA6NHY2 528 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 K7EPI3 171 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 SNNO75324 88 aaPredicted RBP16.78■□□□□ 0.28
COPS7A-202ENST00000455113 LYPLA1O75608 230 aaPredicted RBP16.78■□□□□ 0.28
COPS7A-202ENST00000455113 KLHL18O94889 574 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 ALOX12P18054 663 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 TSPAN8P19075 237 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 IL10P22301 178 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 LSP1P33241 339 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 XCR1P46094 333 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 SLC1A6P48664 564 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 ABCE1P61221 599 aaKnown RBP16.78■□□□□ 0.28
COPS7A-202ENST00000455113 STXBP1P61764 594 aaKnown RBP16.78■□□□□ 0.28
COPS7A-202ENST00000455113 CLCQ05315 142 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 GTF2H2Q13888 395 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 SLBPQ14493 270 aaKnown RBP eCLIP16.78■□□□□ 0.28
COPS7A-202ENST00000455113 XKR6Q5GH73 641 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 PAGE2BQ5JRK9 111 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 GTF2H2CQ6P1K8 395 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 PRSS41Q7RTY9 318 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 LRRC70Q7Z2Q7 622 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 LAPTM4BQ86VI4 370 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 TEX9Q8N6V9 391 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 OR11G2Q8NGC1 345 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 CCT6BQ92526 530 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 SMAD5Q99717 465 aaKnown RBP16.78■□□□□ 0.28
COPS7A-202ENST00000455113 SPNS1Q9H2V7 528 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 EHD1Q9H4M9 534 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 ZBTB26Q9HCK0 441 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 SEMA4BQ9NPR2 832 aaPredicted RBP16.78■□□□□ 0.28
COPS7A-202ENST00000455113 HCN3Q9P1Z3 774 aa16.78■□□□□ 0.28
COPS7A-202ENST00000455113 TNRC6AQ8NDV7 1962 aaKnown RBP16.77■□□□□ 0.28
COPS7A-202ENST00000455113 NSG1A0A0A6YYJ2 146 aa16.77■□□□□ 0.28
COPS7A-202ENST00000455113 BMP10O95393 424 aa16.77■□□□□ 0.28
COPS7A-202ENST00000455113 HPP00738 406 aa16.77■□□□□ 0.28
COPS7A-202ENST00000455113 CHRNGP07510 517 aa16.77■□□□□ 0.28
COPS7A-202ENST00000455113 SERPINA6P08185 405 aa16.77■□□□□ 0.28
COPS7A-202ENST00000455113 SERPINB5P36952 375 aa16.77■□□□□ 0.28
COPS7A-202ENST00000455113 SOX8P57073 446 aa16.77■□□□□ 0.28
COPS7A-202ENST00000455113 NAA20P61599 178 aa16.77■□□□□ 0.28
COPS7A-202ENST00000455113 LAPTM5Q13571 262 aa16.77■□□□□ 0.28
COPS7A-202ENST00000455113 DEFB134Q4QY38 66 aa16.77■□□□□ 0.28
COPS7A-202ENST00000455113 ARL13AQ5H913 290 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms