RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 THUMPD3Q9BV44 507 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 SEMA6CQ9H3T2 930 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 EVA1AQ9H8M9 152 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 SLC6A20Q9NP91 592 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 GIMAP4Q9NUV9 329 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 ACTR10Q9NZ32 417 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 SCHIP1Q9P0W5 487 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 RIMS3Q9UJD0 308 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 PILRAQ9UKJ1 303 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 SH2B3Q9UQQ2 575 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 SLC22A7Q9Y694 548 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 SPACA6W5XKT8 324 aa6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 ARHGEF17Q96PE2 2063 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-210ENST00000454859 IGKV1-8A0A0C4DH67 115 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 TCRBV5S2A0A599 114 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 OR5K3A6NET4 321 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 OR52A4PA6NMU1 304 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 DEAF1O75398 565 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 BMP10O95393 424 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 MSL3P1P0C860 447 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 CD72P21854 359 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 HIST1H1TP22492 207 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 PEBP1P30086 187 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 PPP2R1BP30154 601 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 PCGF2P35227 344 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 C21orf59P57076 290 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 TAS2R50P59544 299 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 PHC1P78364 1004 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 RPL6Q02878 288 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 SQSTM1Q13501 440 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 TSTA3Q13630 321 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 PLCL1Q15111 1095 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 ATP6AP1Q15904 470 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 ZNF630Q2M218 657 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 PRRT3Q5FWE3 981 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 YOD1Q5VVQ6 348 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 OR4F3Q6IEY1 312 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 SLC30A9Q6PML9 568 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 FIGLAQ6QHK4 219 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 CCDC80Q76M96 950 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 ZNF438Q7Z4V0 828 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 KMT5CQ86Y97 462 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 TICAM1Q8IUC6 712 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 ZC3H7AQ8IWR0 971 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 ZDHHC1Q8WTX9 485 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 PMM1Q92871 262 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 RERGQ96A58 199 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 TCTN2Q96GX1 697 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 PPM1MQ96MI6 270 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 ZFYVE21Q9BQ24 234 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 C9orf16Q9BUW7 83 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 OR51B5Q9H339 312 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 TM9SF3Q9HD45 589 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 BATF3Q9NR55 127 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 C1GALT1Q9NS00 363 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 SEMA3GQ9NS98 782 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 DCAF13Q9NV06 445 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 CUEDC1Q9NWM3 386 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 SLC25A37Q9NYZ2 338 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 FBXO4Q9UKT5 387 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 POMT2Q9UKY4 750 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 PLAGL1Q9UM63 463 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 PLEKHM1Q9Y4G2 1056 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 NEUROG3Q9Y4Z2 214 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 A0A1B0GTW7 788 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 H0Y8X5 98 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 TOX3O15405 576 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 PDPK1O15530 556 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 PDE9AO76083 593 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 PRSS23O95084 383 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 BAG2O95816 211 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 AGR2O95994 175 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 KLK1P06870 262 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 FAM58BPP0C7Q3 252 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 LAMP1P11279 417 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 UGT2B7P16662 529 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 TLX1P31314 330 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 SSR2P43308 183 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 RPS6KA3P51812 740 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 PCBP4P57723 403 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 MRPS22P82650 360 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 HHEXQ03014 270 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 CHRNB3Q05901 458 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 EPS8Q12929 822 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 GPR18Q14330 331 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 CAPRIN1Q14444 709 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 RABL3Q5HYI8 236 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 TJAP1Q5JTD0 557 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 TPRG1LQ5T0D9 272 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 TMTC4Q5T4D3 741 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 PEAR1Q5VY43 1037 aaPredicted RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 PIWIL3Q7Z3Z3 882 aaKnown RBP6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 MSRB3Q8IXL7 192 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 ADGRG5Q8IZF4 528 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 SVOPLQ8N434 492 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 C11orf65Q8NCR3 313 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 ICA1LQ8NDH6 482 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 OR4E2Q8NGC2 313 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 ZFP90Q8TF47 636 aa6.51□□□□□ -1.37
ECHDC1-210ENST00000454859 RASSF5Q8WWW0 418 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms