RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 TRIM54Q9BYV2 358 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 DLL3Q9NYJ7 618 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 SLC22A7Q9Y694 548 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 MYO9BQ13459 2157 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 OTOGLQ3ZCN5 2332 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 MAGEB17A8MXT2 336 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 TRIM16O95361 564 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 TSPAN19P0C672 248 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 ESRRAP11474 423 aaPredicted RBP4.7□□□□□ -1.66
RIF1-207ENST00000454583 RPL10P27635 214 aaKnown RBP4.7□□□□□ -1.66
RIF1-207ENST00000454583 SHMT2P34897 504 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 MPLP40238 635 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 RUNX2Q13950 521 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 CYLC2Q14093 348 aaPredicted RBP4.7□□□□□ -1.66
RIF1-207ENST00000454583 HKDC1Q2TB90 917 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 HEPHL1Q6MZM0 1159 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 PPP4R4Q6NUP7 873 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 H3F3CQ6NXT2 135 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 GUSBP11Q6P575 273 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 CCDC80Q76M96 950 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 TAS2R42Q7RTR8 314 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 DEFB107AQ8IZN7 70 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 MMP21Q8N119 569 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 MYO1HQ8N1T3 1032 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 RYBPQ8N488 228 aaPredicted RBP4.7□□□□□ -1.66
RIF1-207ENST00000454583 WDR48Q8TAF3 677 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 LIN37Q96GY3 246 aaPredicted RBP4.7□□□□□ -1.66
RIF1-207ENST00000454583 ZNF184Q99676 751 aaPredicted RBP4.7□□□□□ -1.66
RIF1-207ENST00000454583 NPAS2Q99743 824 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 RAB11FIP5Q9BXF6 653 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 GSDMCQ9BYG8 508 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 ANKRD60Q9BZ19 345 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 TRIT1Q9H3H1 467 aaKnown RBP4.7□□□□□ -1.66
RIF1-207ENST00000454583 MUC13Q9H3R2 512 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 ASCL3Q9NQ33 180 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 SLC6A14Q9UN76 642 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 TMED5Q9Y3A6 229 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 PCDHB3Q9Y5E6 796 aa4.7□□□□□ -1.66
RIF1-207ENST00000454583 FAM234BA2RU67 622 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 ETV2O00321 342 aaPredicted RBP4.69□□□□□ -1.66
RIF1-207ENST00000454583 IFRD1O00458 451 aaPredicted RBP4.69□□□□□ -1.66
RIF1-207ENST00000454583 DIAPH2O60879 1101 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 PCDH8O95206 1070 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 CLDN9O95484 217 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 IGKV3-11P04433 115 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 CYC1P08574 325 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 JUNDP17535 347 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 PEX2P28328 305 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 SLC7A1P30825 629 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 HNF4AP41235 474 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 AQP4P55087 323 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 GFERP55789 205 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 CLDN8P56748 225 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 PCBP3P57721 371 aaKnown RBP4.69□□□□□ -1.66
RIF1-207ENST00000454583 RUNDC3AQ59EK9 446 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 ZNF628Q5EBL2 1059 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 WDR45BQ5MNZ6 344 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 CHST15Q7LFX5 561 aaPredicted RBP4.69□□□□□ -1.66
RIF1-207ENST00000454583 CA13Q8N1Q1 262 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 DTWD1Q8N5C7 304 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 OR8J3Q8NGG0 315 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 OR2I1PQ8NGU4 316 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 SNRNP27Q8WVK2 155 aaKnown RBP4.69□□□□□ -1.66
RIF1-207ENST00000454583 TFAP2CQ92754 450 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 LRRC58Q96CX6 371 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 SPACA7Q96KW9 195 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 FRMD6Q96NE9 622 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 CATSPER2Q96P56 530 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 GBP5Q96PP8 586 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 CD180Q99467 661 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 BTBD2Q9BX70 525 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 TRIM45Q9H8W5 580 aaPredicted RBP4.69□□□□□ -1.66
RIF1-207ENST00000454583 WDR41Q9HAD4 459 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 EML4Q9HC35 981 aaKnown RBP4.69□□□□□ -1.66
RIF1-207ENST00000454583 DNAJC11Q9NVH1 559 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 ACTR3BQ9P1U1 418 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 DKK4Q9UBT3 224 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 RNF112Q9ULX5 631 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 CLCA2Q9UQC9 943 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 LRCH1Q9Y2L9 728 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 PCDHGA1Q9Y5H4 931 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 A0A0J9YY10 115 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 AQP12BA6NM10 295 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 NPIPB9F8W1W9 429 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 GDF9O60383 454 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 KLF7O75840 302 aaPredicted RBP4.69□□□□□ -1.66
RIF1-207ENST00000454583 NEBLO76041 1014 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 UBXN7O94888 489 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 ZCCHC18P0CG32 403 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 HGFP14210 728 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 CHRM3P20309 590 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 NDUFS1P28331 727 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 CDH13P55290 713 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 GPLD1P80108 840 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 GK3PQ14409 553 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 SLC36A3Q495N2 470 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 PRAMEF14Q5SWL7 426 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 DEPDC1Q5TB30 811 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 PRAMEF13Q5VWM6 474 aa4.69□□□□□ -1.66
RIF1-207ENST00000454583 PTRHD1Q6GMV3 140 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms