RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 MC1RQ01726 317 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 ACSM2AQ08AH3 577 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 KLF10Q13118 480 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 SPIDRQ14159 915 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 TRIP6Q15654 476 aaKnown RBP10.43□□□□□ -0.74
SCN9A-205ENST00000454569 PHF19Q5T6S3 580 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 METTL21CQ5VZV1 264 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 ACSM2BQ68CK6 577 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 CYP20A1Q6UW02 462 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 GK5Q6ZS86 529 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 SPATA19Q7Z5L4 167 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 MARCH9Q86YJ5 346 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 CSNK1A1LQ8N752 337 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 PROKR1Q8TCW9 393 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 GFM2Q969S9 779 aaKnown RBP10.43□□□□□ -0.74
SCN9A-205ENST00000454569 ZNF501Q96CX3 271 aaPredicted RBP10.43□□□□□ -0.74
SCN9A-205ENST00000454569 C10orf90Q96M02 699 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 QRFPRQ96P65 431 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 TSSK3Q96PN8 268 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 APMAPQ9HDC9 416 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 ADGRE2Q9UHX3 823 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 A0A1W2PNU3 283 aaPredicted RBP10.43□□□□□ -0.74
SCN9A-205ENST00000454569 ZNF860A6NHJ4 632 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 TMEM150CB9EJG8 249 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 PCDH7O60245 1069 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 UBOX5O94941 541 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 LRATO95237 230 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 TIAF1O95411 115 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 ANKRD34CP0C6C1 535 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 CCL4P13236 92 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 IL1RNP18510 177 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 CERS1P27544 350 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 TIA1P31483 386 aaKnown RBP eCLIP10.43□□□□□ -0.74
SCN9A-205ENST00000454569 OLR1P78380 273 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 PWP1Q13610 501 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 RUNX2Q13950 521 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 CRTC2Q53ET0 693 aaPredicted RBP10.43□□□□□ -0.74
SCN9A-205ENST00000454569 ZC3H12BQ5HYM0 836 aaKnown RBP10.43□□□□□ -0.74
SCN9A-205ENST00000454569 TMEM164Q5U3C3 297 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 OR4C11Q6IEV9 310 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 TMEM214Q6NUQ4 689 aaKnown RBP10.43□□□□□ -0.74
SCN9A-205ENST00000454569 DHRS13Q6UX07 377 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 POU5F2Q8N7G0 328 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 PLPP7Q8NBV4 271 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 TTLQ8NG68 377 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 OR2L5Q8NG80 312 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.43□□□□□ -0.74
SCN9A-205ENST00000454569 PMEPA1Q969W9 287 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 RGMAQ96B86 450 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 TMEM74Q96NL1 305 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 BRINP2Q9C0B6 783 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 CHRNA10Q9GZZ6 450 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 SLC52A3Q9NQ40 469 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 SDR39U1Q9NRG7 319 aaPredicted RBP10.43□□□□□ -0.74
SCN9A-205ENST00000454569 SIRT5Q9NXA8 310 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 SIDT1Q9NXL6 827 aaKnown RBP10.43□□□□□ -0.74
SCN9A-205ENST00000454569 PLCL2Q9UPR0 1127 aa10.43□□□□□ -0.74
SCN9A-205ENST00000454569 TMEM184BQ9Y519 407 aaPredicted RBP10.43□□□□□ -0.74
SCN9A-205ENST00000454569 A0A0A6YYD5 115 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 LOC100653049A0A140TA62 436 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 AKAP10O43572 662 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 FOXS1O43638 330 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 PRKRAO75569 313 aaKnown RBP10.42□□□□□ -0.74
SCN9A-205ENST00000454569 RFPL3O75679 317 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 KRT34O76011 436 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 CBX6O95503 412 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 ANXA4P09525 319 aaPredicted RBP10.42□□□□□ -0.74
SCN9A-205ENST00000454569 ATP5A1P25705 553 aaKnown RBP10.42□□□□□ -0.74
SCN9A-205ENST00000454569 PIK3R1P27986 724 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 SERPINB1P30740 379 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 RAP1GDS1P52306 607 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 PHC1P78364 1004 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 BTN3A2P78410 334 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 PHEXP78562 749 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 DEFB134Q4QY38 66 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 AGKQ53H12 422 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 C10orf62Q5T681 223 aaPredicted RBP10.42□□□□□ -0.74
SCN9A-205ENST00000454569 CDCP2Q5VXM1 449 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 ANKRD26P1Q6NSI1 321 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 GALNT18Q6P9A2 607 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 CARFQ8N187 725 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 TBC1D19Q8N5T2 526 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 METTL27Q8N6F8 245 aaPredicted RBP10.42□□□□□ -0.74
SCN9A-205ENST00000454569 ZNF655Q8N720 491 aaPredicted RBP10.42□□□□□ -0.74
SCN9A-205ENST00000454569 ACOT4Q8N9L9 421 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 CAMKVQ8NCB2 501 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 OR5T3Q8NGG3 340 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 C16orf78Q8WTQ4 265 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 RERGQ96A58 199 aaPredicted RBP10.42□□□□□ -0.74
SCN9A-205ENST00000454569 TM4SF18Q96CE8 201 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 CDC6Q99741 560 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 DDX31Q9H8H2 851 aaKnown RBP10.42□□□□□ -0.74
SCN9A-205ENST00000454569 PFDN4Q9NQP4 134 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 FGF21Q9NSA1 209 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 ASIC5Q9NY37 505 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 NOP53Q9NZM5 478 aaKnown RBP10.42□□□□□ -0.74
SCN9A-205ENST00000454569 CCDC167Q9P0B6 97 aa10.42□□□□□ -0.74
SCN9A-205ENST00000454569 SDK2Q58EX2 2172 aa10.41□□□□□ -0.74
SCN9A-205ENST00000454569 A0A0A6YYC8 382 aaPredicted RBP10.41□□□□□ -0.74
SCN9A-205ENST00000454569 I3L1I5 382 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms