RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 TBC1D20Q96BZ9 403 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 PEX11GQ96HA9 241 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 APOPT1Q96IL0 206 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 VPS50Q96JG6 964 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 SMAD5Q99717 465 aaKnown RBP13.36□□□□□ -0.27
HDAC4-205ENST00000454542 RBCK1Q9BYM8 510 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 ZNF700Q9H0M5 742 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 PRDM7Q9NQW5 492 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 PSD3Q9NYI0 1048 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 ZNF225Q9UK10 706 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 MKL2Q9ULH7 1088 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 TP53TG5Q9Y2B4 290 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 RNF11Q9Y3C5 154 aa13.36□□□□□ -0.27
HDAC4-205ENST00000454542 TNRC6AQ8NDV7 1962 aaKnown RBP13.35□□□□□ -0.27
HDAC4-205ENST00000454542 A0A088AWK7 358 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 IGKV3D-11A0A0A0MRZ8 115 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 K7EM74 188 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 MASP2O00187 686 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 C8orf89P0DMQ9 161 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 PCNAP12004 261 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 RNH1P13489 461 aaKnown RBP13.35□□□□□ -0.27
HDAC4-205ENST00000454542 KRT4P19013 534 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 ZNF10P21506 573 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-205ENST00000454542 JAK1P23458 1154 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 CERS1P27544 350 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 TSFMP43897 325 aaKnown RBP13.35□□□□□ -0.27
HDAC4-205ENST00000454542 MTTPP55157 894 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 Q0VFX4 171 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 AIMP2Q13155 320 aaKnown RBP13.35□□□□□ -0.27
HDAC4-205ENST00000454542 MYBPC3Q14896 1274 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 ZRSR2Q15696 482 aaKnown RBP13.35□□□□□ -0.27
HDAC4-205ENST00000454542 KHDRBS2Q5VWX1 349 aaKnown RBP13.35□□□□□ -0.27
HDAC4-205ENST00000454542 LETMD1Q6P1Q0 360 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 LANCL3Q6ZV70 420 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 RPS27LQ71UM5 84 aaKnown RBP13.35□□□□□ -0.27
HDAC4-205ENST00000454542 C4orf33Q8N1A6 199 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 GALNT16Q8N428 558 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 RNF175Q8N4F7 328 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 CLEC1AQ8NC01 280 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 SRFBP1Q8NEF9 429 aaKnown RBP13.35□□□□□ -0.27
HDAC4-205ENST00000454542 MYRIPQ8NFW9 859 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 RDH11Q8TC12 318 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 C8orf44Q96CB5 159 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 REPS1Q96D71 796 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 CMTM7Q96FZ5 175 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 MAGEB10Q96LZ2 347 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-205ENST00000454542 KCNC2Q96PR1 638 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 CDK15Q96Q40 435 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 F2RL3Q96RI0 385 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 SERINC2Q96SA4 455 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 ZNF382Q96SR6 550 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 WDR77Q9BQA1 342 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-205ENST00000454542 SLC25A23Q9BV35 468 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 NUDT9Q9BW91 350 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 YIPF2Q9BWQ6 316 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 ZNF717Q9BY31 904 aaPredicted RBP13.35□□□□□ -0.27
HDAC4-205ENST00000454542 RIC8BQ9NVN3 520 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 TRPS1Q9UHF7 1281 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 PLAAQ9Y263 795 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 CLDN16Q9Y5I7 305 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 CPAMD8Q8IZJ3 1885 aa13.35□□□□□ -0.27
HDAC4-205ENST00000454542 DOCK10Q96BY6 2186 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 A0A0G2JN53 185 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 MAGEB17A8MXT2 336 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 FOXE1O00358 373 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-205ENST00000454542 PPP6CO00743 305 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 COPEO14579 308 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 SEMA3DO95025 777 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 ETHE1O95571 254 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 OTCP00480 354 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 NR1D1P20393 614 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 IMPDH1P20839 514 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 CCT5P48643 541 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 CCL11P51671 97 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 PLA2G16P53816 162 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 CDH13P55290 713 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 RAB38P57729 211 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 BTN3A2P78410 334 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 CLCQ05315 142 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 EEF1A2Q05639 463 aaKnown RBP13.34□□□□□ -0.27
HDAC4-205ENST00000454542 TGM3Q08188 693 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 ZNF844Q08AG5 666 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 IFFO1Q0D2I5 559 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 RUNX2Q13950 521 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 CPSF6Q16630 551 aaKnown RBP eCLIP13.34□□□□□ -0.27
HDAC4-205ENST00000454542 MINDY4Q4G0A6 757 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 DEPDC1Q5TB30 811 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 VWA5B1Q5TIE3 1220 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 NDUFAF7Q7L592 441 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 SCUBE1Q8IWY4 988 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 BANPQ8N9N5 519 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 OR4F6Q8NGB9 312 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 TSLPQ969D9 159 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 CCDC126Q96EE4 140 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 FAR2Q96K12 515 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 TBCDQ9BTW9 1192 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 ROGDIQ9GZN7 287 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 GSTO2Q9H4Y5 243 aa13.34□□□□□ -0.27
HDAC4-205ENST00000454542 SEMA4BQ9NPR2 832 aaPredicted RBP13.34□□□□□ -0.27
HDAC4-205ENST00000454542 ATP13A2Q9NQ11 1180 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms