RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 SLC1A2P43004 574 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 SCTRP47872 440 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 ZFP36L2P47974 494 aaKnown RBP13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 ST13P50502 369 aaKnown RBP13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 HSD17B7P56937 341 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 DHX9Q08211 1270 aaKnown RBP13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 CTBP1Q13363 440 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 GXYLT1Q4G148 440 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 CCDC71Q8IV32 467 aaPredicted RBP13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 DENND6AQ8IWF6 608 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 MCUQ8NE86 351 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 OR56A3Q8NH54 315 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 UTP15Q8TED0 518 aaKnown RBP13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 ZNF669Q96BR6 464 aaPredicted RBP13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 MBD6Q96DN6 1003 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 RMND5BQ96G75 393 aaPredicted RBP13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 SNF8Q96H20 258 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 TTYH2Q9BSA4 534 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 TRIM54Q9BYV2 358 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 ATG10Q9H0Y0 220 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 FBXO6Q9NRD1 293 aaPredicted RBP13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 HPF1Q9NWY4 346 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 TAS2R13Q9NYV9 303 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 ERVK-11Q9UQG0 969 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 PCDHGB3Q9Y5G1 929 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 SCN3AQ9NY46 2000 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 TMEM200CA6NKL6 621 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 SUSD5O60279 629 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 ZFAND5O76080 213 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 SERPINA6P08185 405 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 ENO2P09104 434 aaPredicted RBP13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 MAOAP21397 527 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 DNASE1P24855 282 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 GSTM2P28161 218 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 HPDP32754 393 aaPredicted RBP13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 RFC3P40938 356 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 PPIAP62937 165 aaKnown RBP13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 BTG2P78543 158 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 CSHL1Q14406 222 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 PHKG1Q16816 387 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 MDGA2Q7Z553 956 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 GOLM1Q8NBJ4 401 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 C7orf57Q8NEG2 295 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 OR2M7Q8NG81 312 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 OR52N2Q8NGI0 321 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 LRRC46Q96FV0 321 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 NPLQ9BXD5 320 aaPredicted RBP13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 POLDIP3Q9BY77 421 aaKnown RBP13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 DLL4Q9NR61 685 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 CCM2LQ9NUG4 571 aaPredicted RBP13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 ZFATQ9P243 1243 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 ADAMTS6Q9UKP5 1117 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 FBXO5Q9UKT4 447 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 FBXW2Q9UKT8 454 aa13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 MRPS33Q9Y291 106 aaKnown RBP13.3□□□□□ -0.28
LYSMD3-202ENST00000453259 A0A088AWK7 358 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 CLDN4O14493 209 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 AQP7O14520 342 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 MYO1DO94832 1006 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 GLSO94925 669 aaPredicted RBP13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 GOSR1O95249 250 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 SMIM10L1P0DMW3 83 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 GABRA1P14867 456 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 ZNF10P21506 573 aaPredicted RBP13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 ZNF75DP51815 510 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 GPR85P60893 370 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 OLR1P78380 273 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 PLGLB1Q02325 96 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 TBL3Q12788 808 aaKnown RBP13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 HYAL4Q2M3T9 481 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 ARSKQ6UWY0 536 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 CAND1Q86VP6 1230 aaKnown RBP13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 TMEM139Q8IV31 216 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 SCUBE1Q8IWY4 988 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 FAM109AQ8N4B1 249 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 OR10Q1Q8NGQ4 319 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 OR8K3Q8NH51 312 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 EEF1AKMT1Q8WVE0 214 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 SLC5A11Q8WWX8 675 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 ASB15Q8WXK1 588 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 SARAFQ96BY9 339 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 SMIM10Q96HG1 83 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 SGCZQ96LD1 299 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 SMC6Q96SB8 1091 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 FAM173AQ9BQD7 235 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 AIF1LQ9BQI0 150 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 CLEC4MQ9H2X3 399 aaPredicted RBP13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 PELI2Q9HAT8 420 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 ADAP2Q9NPF8 381 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 C20orf96Q9NUD7 363 aaPredicted RBP13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 ARL15Q9NXU5 204 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 KCMF1Q9P0J7 381 aa13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 PRRC2AP48634 2157 aaKnown RBP13.29□□□□□ -0.28
LYSMD3-202ENST00000453259 ABCA4P78363 2273 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 TCRBV7S3A2A0A539 114 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 NPIPA2E9PIF3 369 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 NPIPA3F8WFD2 350 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 PDE9AO76083 593 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 SERPIND1P05546 499 aa13.28□□□□□ -0.28
LYSMD3-202ENST00000453259 GLI4P10075 376 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms