RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 ICAM2P13598 275 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 GFAPP14136 432 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 CRABP2P29373 138 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 PPP2R1BP30154 601 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 ARL1P40616 181 aaPredicted RBP9.09□□□□□ -0.95
USP54-207ENST00000451492 SERPINB8P50452 374 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 TNFSF10P50591 281 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 HNRNPFP52597 415 aaKnown RBP9.09□□□□□ -0.95
USP54-207ENST00000451492 SLC26A5P58743 744 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 AP2B1P63010 937 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 RUNX2Q13950 521 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 PLAG1Q6DJT9 500 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 CLEC18BQ6UXF7 455 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 CYS1Q717R9 158 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 VN1R5Q7Z5H4 357 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 ISCA2Q86U28 154 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 CENPLQ8N0S6 344 aaPredicted RBP9.09□□□□□ -0.95
USP54-207ENST00000451492 MMGT1Q8N4V1 131 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 TEX9Q8N6V9 391 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 CLEC18CQ8NCF0 446 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 MNS1Q8NEH6 495 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 TTLQ8NG68 377 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 SSC4DQ8WTU2 575 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 THAP3Q8WTV1 239 aaPredicted RBP9.09□□□□□ -0.95
USP54-207ENST00000451492 MS4A6EQ96DS6 147 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 F2RL3Q96RI0 385 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 CSF3RQ99062 836 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 CAPS2Q9BXY5 557 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 HES7Q9BYE0 225 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 CD244Q9BZW8 370 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 REXO4Q9GZR2 422 aaKnown RBP9.09□□□□□ -0.95
USP54-207ENST00000451492 KLHL1Q9NR64 748 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 PNO1Q9NRX1 252 aaKnown RBP9.09□□□□□ -0.95
USP54-207ENST00000451492 OLAHQ9NV23 265 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 STMN3Q9NZ72 180 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 TEKT2Q9UIF3 430 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 PTBP2Q9UKA9 531 aaKnown RBP9.09□□□□□ -0.95
USP54-207ENST00000451492 ANGPTL3Q9Y5C1 460 aa9.09□□□□□ -0.95
USP54-207ENST00000451492 ZGRF1Q86YA3 2104 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 HECTD1Q9ULT8 2610 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 A0A096LPK6 155 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 TRAV17A0A0B4J275 112 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 LRIT2A6NDA9 550 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 OR5H15A6NDH6 313 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 SAGE2PA6NJ88 616 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 GABRR3A8MPY1 467 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 E2F3O00716 465 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 B3GALT2O43825 422 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 MYO1DO94832 1006 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 INHBAP08476 426 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 CYC1P08574 325 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 SMIM10L1P0DMW3 83 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 EPORP19235 508 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 IL10P22301 178 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 TYK2P29597 1187 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 GGT5P36269 586 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 RAB38P57729 211 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 KCNK10P57789 538 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 TAS2R50P59544 299 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 OC90Q02509 493 aaPredicted RBP9.08□□□□□ -0.96
USP54-207ENST00000451492 SLC13A2Q13183 592 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 EXT1Q16394 746 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 HIST2H2ACQ16777 129 aaPredicted RBP9.08□□□□□ -0.96
USP54-207ENST00000451492 PFKFB4Q16877 469 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 FAM83EQ2M2I3 478 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 PAGE2BQ5JRK9 111 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 ACER2Q5QJU3 275 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 HIST2H2AA3Q6FI13 130 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 NIPAL1Q6NVV3 410 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 KLC3Q6P597 504 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 QSOX2Q6ZRP7 698 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 BCORP1Q8N888 145 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 ST6GALNAC3Q8NDV1 305 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 TMEM52Q8NDY8 209 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 PLPP5Q8NEB5 264 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 M1APQ8TC57 530 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 FAR1Q8WVX9 515 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 TRIM44Q96DX7 344 aaPredicted RBP9.08□□□□□ -0.96
USP54-207ENST00000451492 SMIM10Q96HG1 83 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 SCYL1Q96KG9 808 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 ZNF354BQ96LW1 612 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 SIGLEC12Q96PQ1 595 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 PAFAH2Q99487 392 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 NPAS2Q99743 824 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 EFCAB11Q9BUY7 163 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 CDCP1Q9H5V8 836 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 ACSS3Q9H6R3 686 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 PRDM9Q9NQV7 894 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 PRTFDC1Q9NRG1 225 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 ZNF358Q9NW07 568 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 ABI3Q9P2A4 366 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 ERRFI1Q9UJM3 462 aaPredicted RBP9.08□□□□□ -0.96
USP54-207ENST00000451492 ZNF490Q9ULM2 529 aaPredicted RBP9.08□□□□□ -0.96
USP54-207ENST00000451492 OSGIN2Q9Y236 505 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 IKBKGQ9Y6K9 419 aa9.08□□□□□ -0.96
USP54-207ENST00000451492 SVILO95425 2214 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 EML6Q6ZMW3 1958 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 A0A088AWK7 358 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 TCRBV16S1A1N1A0A5B0 115 aa9.07□□□□□ -0.96
USP54-207ENST00000451492 HMX2A2RU54 273 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms