RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 GALR3O60755 368 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-203ENST00000449049 DCTN3O75935 186 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 KCNK5O95279 499 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 KLK1P06870 262 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 PCSK2P16519 638 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 NCF2P19878 526 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-203ENST00000449049 ATP5A1P25705 553 aaKnown RBP13.34□□□□□ -0.27
SHMT2-203ENST00000449049 TSPAN7P41732 249 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 FOXM1Q08050 763 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 LIX1Q8N485 282 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 CPSF7Q8N684 471 aaKnown RBP13.34□□□□□ -0.27
SHMT2-203ENST00000449049 AMER3Q8N944 861 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 SAR1AQ9NR31 198 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 SDR39U1Q9NRG7 319 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-203ENST00000449049 G3BP2Q9UN86 482 aaKnown RBP13.34□□□□□ -0.27
SHMT2-203ENST00000449049 LOXL2Q9Y4K0 774 aa13.34□□□□□ -0.27
SHMT2-203ENST00000449049 COPG1Q9Y678 874 aaKnown RBP13.34□□□□□ -0.27
SHMT2-203ENST00000449049 A0A088AWK7 358 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 ANKRD65E5RJM6 399 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 FCHO1O14526 889 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 B3GALT4O96024 378 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 GBAP04062 536 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 ANXA4P09525 319 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-203ENST00000449049 G6PDP11413 515 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 CCL4P13236 92 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 ZNF10P21506 573 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-203ENST00000449049 TACR1P25103 407 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 ARSFP54793 590 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 MTTPP55157 894 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 BTN3A2P78410 334 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 SQLEQ14534 574 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 MUM1Q2TAK8 710 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 FAM214AQ32MH5 1076 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 DEFB134Q4QY38 66 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 PDCD4Q53EL6 469 aaKnown RBP13.33□□□□□ -0.28
SHMT2-203ENST00000449049 NIPAL1Q6NVV3 410 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 CYP20A1Q6UW02 462 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 PRSS41Q7RTY9 318 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 MTDHQ86UE4 582 aaKnown RBP13.33□□□□□ -0.28
SHMT2-203ENST00000449049 PDSS2Q86YH6 399 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 ACOT4Q8N9L9 421 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 SERINC2Q96SA4 455 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 RTKNQ9BST9 563 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 COPS7BQ9H9Q2 264 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-203ENST00000449049 CUTCQ9NTM9 273 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 MRGBPQ9NV56 204 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 AGRPO00253 132 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 ANKRD28O15084 1053 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 ZNF749O43361 778 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 FOXS1O43638 330 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 TMPRSS11DO60235 418 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 IL1RNP18510 177 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 SDHBP21912 280 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 CERS1P27544 350 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 GSTM5P46439 218 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 TRA2BP62995 288 aaKnown RBP13.33□□□□□ -0.28
SHMT2-203ENST00000449049 ZNF763Q0D2J5 394 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 EIF3IQ13347 325 aaKnown RBP13.33□□□□□ -0.28
SHMT2-203ENST00000449049 RSPO4Q2I0M5 234 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-203ENST00000449049 CCNYL2Q5T2Q4 361 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 MRM1Q6IN84 353 aaKnown RBP13.33□□□□□ -0.28
SHMT2-203ENST00000449049 RAB11FIP2Q7L804 512 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 CLNKQ7Z7G1 428 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 PPP1R3BQ86XI6 285 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.33□□□□□ -0.28
SHMT2-203ENST00000449049 ANKHQ9HCJ1 492 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 APMAPQ9HDC9 416 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 NAALAD2Q9Y3Q0 740 aa13.33□□□□□ -0.28
SHMT2-203ENST00000449049 CCDC187A0A096LP49 1063 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 GNG14A0A1W2PPG7 69 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 ARHGAP10A1A4S6 786 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 POLR1CO15160 346 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-203ENST00000449049 NSA2O95478 260 aaKnown RBP13.32□□□□□ -0.28
SHMT2-203ENST00000449049 GPX3P22352 226 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 MAPK12P53778 367 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 STX1BP61266 288 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 PTGR1Q14914 329 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.32□□□□□ -0.28
SHMT2-203ENST00000449049 PRAMEF17Q5VTA0 474 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 TMPRSS12Q86WS5 348 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 FAM9CQ8IZT9 166 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 ADAMTS14Q8WXS8 1223 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 MVB12AQ96EY5 273 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 LRRC37BQ96QE4 947 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 NDC1Q9BTX1 674 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 ACTL8Q9H568 366 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 MYNNQ9NPC7 610 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 BAIAP2L1Q9UHR4 511 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 SRPK3Q9UPE1 567 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 PCDHB3Q9Y5E6 796 aa13.32□□□□□ -0.28
SHMT2-203ENST00000449049 TIAF1O95411 115 aa13.31□□□□□ -0.28
SHMT2-203ENST00000449049 ADSLP30566 484 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-203ENST00000449049 C21orf58P58505 322 aa13.31□□□□□ -0.28
SHMT2-203ENST00000449049 SKP1P63208 163 aa13.31□□□□□ -0.28
SHMT2-203ENST00000449049 SLAMF1Q13291 335 aa13.31□□□□□ -0.28
SHMT2-203ENST00000449049 UBAP2LQ14157 1087 aaKnown RBP13.31□□□□□ -0.28
SHMT2-203ENST00000449049 SLC9A5Q14940 896 aa13.31□□□□□ -0.28
SHMT2-203ENST00000449049 RHBDD2Q6NTF9 364 aa13.31□□□□□ -0.28
SHMT2-203ENST00000449049 PWWP2BQ6NUJ5 590 aa13.31□□□□□ -0.28
SHMT2-203ENST00000449049 MIER2Q8N344 545 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms