RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 MRPS30Q9NP92 439 aaKnown RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 ANKMY1Q9P2S6 941 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 ADGRE2Q9UHX3 823 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 POU2F3Q9UKI9 436 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 GON4LQ3T8J9 2241 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 FAM234BA2RU67 622 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 ANKDD1BA6NHY2 528 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 C9JVG2 144 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 MRASO14807 208 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 PRICKLE3O43900 615 aaPredicted RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 MYO1DO94832 1006 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 ZBTB11O95625 1053 aaPredicted RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 ACPPP15309 386 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 ZNF23P17027 643 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 AMD1P17707 334 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 JAK1P23458 1154 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 CMPK1P30085 196 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 CSTF2P33240 577 aaKnown RBP eCLIP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 CBX5P45973 191 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 CLK3P49761 638 aaKnown RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 POLR2JP52435 117 aaKnown RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 IST1P53990 364 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 UBE2IP63279 158 aaKnown RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 RCAN2Q14206 197 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 GPR18Q14330 331 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 PTGR1Q14914 329 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 TEAD4Q15561 434 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 CEP78Q5JTW2 689 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 LYSMD4Q5XG99 296 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 SLC9B2Q86UD5 537 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 C1orf210Q8IVY1 113 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 DEFB107AQ8IZN7 70 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 DSELQ8IZU8 1212 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 OR2L3Q8NG85 312 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 LMX1AQ8TE12 382 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 ZDHHC1Q8WTX9 485 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 TEX37Q96LM6 180 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 MROQ9BYG7 248 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 DPY30Q9C005 99 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 DMRT3Q9NQL9 472 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 SPHK1Q9NYA1 384 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 RUVBL1Q9Y265 456 aaKnown RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 NDUFAF1Q9Y375 327 aa7.74□□□□□ -1.17
CCDC39-201ENST00000442201 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.74□□□□□ -1.17
CCDC39-201ENST00000442201 CCDC160A6NGH7 325 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 B4DGG1 531 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 M0QX08 132 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 M0R296 226 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 ANKRD28O15084 1053 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 ACOX3O15254 700 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 TDGF1P13385 188 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 CAPN3P20807 821 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 HRH2P25021 359 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 SERPINB1P30740 379 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 GRK3P35626 688 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 DHPSP49366 369 aaPredicted RBP7.73□□□□□ -1.17
CCDC39-201ENST00000442201 AQP4P55087 323 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 CSNK1G2P78368 415 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 REEP5Q00765 189 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 CSTF1Q05048 431 aaKnown RBP7.73□□□□□ -1.17
CCDC39-201ENST00000442201 SELENBP1Q13228 472 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 KIR2DS3Q14952 304 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 VPS26BQ4G0F5 336 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 REP15Q6BDI9 236 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 NOXRED1Q6NXP6 359 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 SERPINI1Q99574 410 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 HOXD1Q9GZZ0 328 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 ACTL8Q9H568 366 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 NT5DC2Q9H857 520 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 TMEM184CQ9NVA4 438 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 DLGAP4Q9Y2H0 992 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 ARPC4-TTLL3A0A0A6YYG9 625 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 A0A1W2PP18 115 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 FAM221BA6H8Z2 402 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 CCDC154A6NI56 674 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 BTN3A3O00478 584 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 SH3BGRLO75368 114 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 ETHE1O95571 254 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 TGFB1P01137 390 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 PTX3P26022 381 aaPredicted RBP7.73□□□□□ -1.17
CCDC39-201ENST00000442201 PEBP1P30086 187 aaKnown RBP7.73□□□□□ -1.17
CCDC39-201ENST00000442201 MYBPC1Q00872 1141 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 HHEXQ03014 270 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 SPIN4Q56A73 249 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 ADGRF3Q8IZF5 1079 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 PGAM4Q8N0Y7 254 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 TBC1D19Q8N5T2 526 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 AVL9Q8NBF6 648 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 GLB1L3Q8NCI6 653 aaPredicted RBP7.73□□□□□ -1.17
CCDC39-201ENST00000442201 TRUB1Q8WWH5 349 aaKnown RBP7.73□□□□□ -1.17
CCDC39-201ENST00000442201 SLC45A3Q96JT2 553 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 LRGUKQ96M69 825 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 DPH7Q9BTV6 452 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 RHBGQ9H310 441 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 SERHL2Q9H4I8 314 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 WDR41Q9HAD4 459 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 PPT2Q9UMR5 302 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 SNX7Q9UNH6 387 aa7.73□□□□□ -1.17
CCDC39-201ENST00000442201 OR1F1O43749 312 aa7.72□□□□□ -1.17
CCDC39-201ENST00000442201 SEC24DO94855 1032 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms