RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 URADA6NGE7 173 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 ANKDD1BA6NHY2 528 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 E7EQ34 232 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 GAPDHSO14556 408 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 OR1I1O60431 355 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 SH3BGRLO75368 114 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 ATP6AP2O75787 350 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 MTHFD1P11586 935 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 OGNP20774 298 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 HTR1EP28566 365 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 TRIM23P36406 574 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 NME5P56597 212 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 BNIP2Q12982 314 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 PDCD4Q53EL6 469 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 SGO1Q5FBB7 561 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 PERM1Q5SV97 790 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 FAAH2Q6GMR7 532 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 CAPN13Q6MZZ7 669 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 SPPL2CQ8IUH8 684 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZNF420Q8TAQ5 688 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 EME1Q96AY2 570 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 CENPNQ96H22 339 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 TMEM79Q9BSE2 394 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 ADI1Q9BV57 179 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 MUC13Q9H3R2 512 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 CCDC177Q9NQR7 707 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 GALNT8Q9NY28 637 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 NDUFAF1Q9Y375 327 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 MSRB2Q9Y3D2 182 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 EPG5Q9HCE0 2579 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 PLXNA2O75051 1894 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 SH3PXD2BA1X283 911 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 C1QTNF9BB2RNN3 333 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 D6RAR5 112 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 TXNDC9O14530 226 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 STX16O14662 325 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 TPD52L2O43399 206 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 IFNA16P05015 189 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 C1QTNF9P0C862 333 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 PCNAP12004 261 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZNF10P21506 573 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 PCMT1P22061 227 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 GPR3P46089 330 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 GSK3BP49841 420 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 ADARP55265 1226 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 RGS1Q08116 209 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 RBBP7Q16576 425 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 ANKDD1AQ495B1 522 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 TTLL10Q6ZVT0 673 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 METTL27Q8N6F8 245 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 FAM47BQ8NA70 645 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZCCHC10Q8TBK6 192 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 SMPDL3AQ92484 453 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 C12orf43Q96C57 262 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 EID2BQ96D98 161 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 FBXL20Q96IG2 436 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 CCDC115Q96NT0 180 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 IL17FQ96PD4 163 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 TEFMQ96QE5 360 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 PHF12Q96QT6 1004 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 MBOAT4Q96T53 435 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 MAP3K3Q99759 626 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 CCT7Q99832 543 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 NAA50Q9GZZ1 169 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 P2RY12Q9H244 342 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 ACTR8Q9H981 624 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 SLAMF7Q9NQ25 335 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 C8orf4Q9NR00 106 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 ADA2Q9NZK5 511 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 SLC17A4Q9Y2C5 497 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 TSPAN11A1L157 253 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 AZIN1O14977 448 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 MAGEB3O15480 346 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 SCRG1O75711 98 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZBTB11O95625 1053 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 PTPN6P29350 595 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 BDKRB1P46663 353 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 CDKN1CP49918 316 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 ILF2Q12905 390 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 SELPLGQ14242 412 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 TPRG1LQ5T0D9 272 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 PRMT9Q6P2P2 845 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 SLC16A12Q6ZSM3 486 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 SZRD1Q7Z422 152 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 TRIM73Q86UV7 250 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 VASH2Q86V25 355 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 NKAPQ8N5F7 415 aaKnown RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 RSC1A1Q92681 617 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 TAAR9Q96RI9 348 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 INSM2Q96T92 566 aaPredicted RBP7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 FAIMQ9NVQ4 179 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 OAZ3Q9UMX2 235 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 SNX13Q9Y5W8 968 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 CHD9Q3L8U1 2897 aa7.07□□□□□ -1.28
CDC42BPA-208ENST00000442054 DHRS12A0PJE2 317 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 CDC14CA4D256 554 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 ZSCAN9O15535 394 aaPredicted RBP7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 ALPLP05186 524 aa7.06□□□□□ -1.28
CDC42BPA-208ENST00000442054 GPIP06744 558 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms