RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 COILP38432 576 aaPredicted RBP9.29□□□□□ -0.92
SYN3-204ENST00000441821 SSR4P51571 173 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 NKX6-1P78426 367 aaPredicted RBP9.29□□□□□ -0.92
SYN3-204ENST00000441821 BTG2P78543 158 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 KLF1Q13351 362 aaPredicted RBP9.29□□□□□ -0.92
SYN3-204ENST00000441821 FBXL19-AS1Q494R0 122 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 C1orf185Q5T7R7 199 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 MRNIPQ6NTE8 343 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 NIPAL1Q6NVV3 410 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 MFSD9Q8NBP5 474 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 ZNF740Q8NDX6 193 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 B3GNT7Q8NFL0 401 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 MAIP1Q8WWC4 291 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 RNASE6Q93091 150 aaKnown RBP9.29□□□□□ -0.92
SYN3-204ENST00000441821 LRRC46Q96FV0 321 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 PBKQ96KB5 322 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 SH3GL2Q99962 352 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 PCBD2Q9H0N5 130 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 CCDC177Q9NQR7 707 aaPredicted RBP9.29□□□□□ -0.92
SYN3-204ENST00000441821 PRDM9Q9NQV7 894 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 BEX4Q9NWD9 120 aaPredicted RBP9.29□□□□□ -0.92
SYN3-204ENST00000441821 FBXW2Q9UKT8 454 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 ACAD8Q9UKU7 415 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 PPIEQ9UNP9 301 aaKnown RBP9.29□□□□□ -0.92
SYN3-204ENST00000441821 ERVK-11Q9UQG0 969 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 LIPGQ9Y5X9 500 aa9.29□□□□□ -0.92
SYN3-204ENST00000441821 GOLGA6L10A0A0M3HER8 536 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 HSPB2A8KAH6 182 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 A8MUA0 341 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 A8MVJ9 347 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 E5RI56 91 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 CES2O00748 559 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 GOSR1O95249 250 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 MPC1LP0DKB6 136 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 EPXP11678 715 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 GABRA1P14867 456 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 ALOX12P18054 663 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 MAOAP21397 527 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 ARNTP27540 789 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 NMBRP28336 390 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 PCSK6P29122 969 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 GRK3P35626 688 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 ASCL1P50553 236 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 CLCN7P51798 805 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 DCAF7P61962 342 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 OLR1P78380 273 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 PWP1Q13610 501 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 TERF2Q15554 542 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 HSPB2Q16082 182 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 TTLL9Q3SXZ7 439 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 WLSQ5T9L3 541 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 SEL1L2Q5TEA6 688 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 FBXW10Q5XX13 1052 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 GK5Q6ZS86 529 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 FAM109AQ8N4B1 249 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 TMEM251Q8N6I4 163 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 OTUD6BQ8N6M0 293 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 ARMC2Q8NEN0 867 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 SLCO2A1Q92959 643 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 SARAFQ96BY9 339 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 VMP1Q96GC9 406 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 COX4I2Q96KJ9 171 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 ATG10Q9H0Y0 220 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 CLK4Q9HAZ1 481 aaKnown RBP9.28□□□□□ -0.92
SYN3-204ENST00000441821 IL1RL2Q9HB29 575 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 NECTIN3Q9NQS3 549 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 HPF1Q9NWY4 346 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 KLHL42Q9P2K6 505 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 FOXD3Q9UJU5 478 aaPredicted RBP9.28□□□□□ -0.92
SYN3-204ENST00000441821 ZNF223Q9UK11 482 aaPredicted RBP9.28□□□□□ -0.92
SYN3-204ENST00000441821 CRYL1Q9Y2S2 319 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 ZNF407Q9C0G0 2248 aa9.28□□□□□ -0.92
SYN3-204ENST00000441821 CUBNO60494 3623 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 A0A0G2JMM0 328 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 A0A1W2PPB8 328 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 A0A1W2PRS3 328 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 KIR3DP1A8MWS1 328 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 DVL2O14641 736 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 SLC16A5O15375 505 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 NDUFS4O43181 175 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 ARHGEF9O43307 516 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 ZFAND5O76080 213 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 MYO1DO94832 1006 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 VAPBO95292 243 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 APRTP07741 180 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 CD53P19397 219 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 CNR1P21554 472 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 TACR1P25103 407 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 MAGEA5P43359 124 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 MAN2A2P49641 1150 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 GPR143P51810 404 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 SESN2P58004 480 aaPredicted RBP9.27□□□□□ -0.93
SYN3-204ENST00000441821 TBPL1P62380 186 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 CRADDP78560 199 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 SLC10A1Q14973 349 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 PCBP2Q15366 365 aaKnown RBP eCLIP9.27□□□□□ -0.93
SYN3-204ENST00000441821 HYAL4Q2M3T9 481 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 DEFB134Q4QY38 66 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 IL20RBQ6UXL0 311 aa9.27□□□□□ -0.93
SYN3-204ENST00000441821 CYHR1Q6ZMK1 362 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms