RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 PRR23D2P0DMB1 279 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 HAPLN1P10915 354 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 LYL1P12980 280 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 STMN1P16949 149 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 GNAZP19086 355 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 NCF2P19878 526 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 PRDX6P30041 224 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 ACSL1P33121 698 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 GRK5P34947 590 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 IDUAP35475 653 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 GCKP35557 465 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 BSGP35613 385 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARL3P36405 182 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 AVPR1AP37288 418 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 CD86P42081 329 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARCN1P48444 511 aaKnown RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 CD151P48509 253 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 SLC11A1P49279 550 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 SERPINH1P50454 418 aaKnown RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 CSRP3P50461 194 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 RPL14P50914 215 aaKnown RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 KPNA2P52292 529 aaKnown RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 RAP1GDS1P52306 607 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARPP19P56211 112 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 YBEYP58557 167 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 RAB10P61026 200 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARHGAP8P85298 464 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 MC1RQ01726 317 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 TLE3Q04726 772 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 EGR4Q05215 589 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 KDSRQ06136 332 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 DMWDQ09019 674 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 SLC10A7Q0GE19 358 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 ILF2Q12905 390 aaKnown RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 ELAVL2Q12926 359 aaKnown RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 PRKAA1Q13131 559 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 GPR17Q13304 367 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 DCTN2Q13561 401 aaKnown RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 RCN2Q14257 317 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 POU6F1Q14863 301 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARHGEF6Q15052 776 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 DLG2Q15700 870 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 ACCSLQ4AC99 568 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 FSCBQ5H9T9 825 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 MS4A13Q5J8X5 152 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 C10orf120Q5SQS8 335 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 MFSD4BQ5TF39 518 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 METTL21CQ5VZV1 264 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 NEPROQ6NW34 567 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 SLC30A6Q6NXT4 461 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 FBXL22Q6P050 247 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 FUT10Q6P4F1 479 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 RFWD3Q6PCD5 774 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 TMEM88Q6PEY1 159 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 SLC22A25Q6T423 547 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 KDELC1Q6UW63 502 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 EPGNQ6UW88 154 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZYG11AQ6WRX3 759 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 NET1Q7Z628 596 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 TFAP2DQ7Z6R9 452 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 CNTN4Q8IWV2 1026 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 LMNTD2Q8IXW0 634 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZNF683Q8IZ20 524 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 FBXL14Q8N1E6 418 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 SLC25A41Q8N5S1 370 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 TDRD5Q8NAT2 981 aaKnown RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 RBM15BQ8NDT2 890 aaKnown RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 DBF4BQ8NFT6 615 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 SPPL2BQ8TCT7 592 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 CD99L2Q8TCZ2 262 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 RAET1EQ8TD07 263 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 C2orf15Q8WU43 125 aaKnown RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 PDCD6IPQ8WUM4 868 aaKnown RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 SEPT8Q92599 483 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 IGSF8Q969P0 613 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 PABPC5Q96DU9 382 aaKnown RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM120BQ96EK7 910 aaKnown RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 IMP4Q96G21 291 aaKnown RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 ELMO2Q96JJ3 720 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 BTN2A3PQ96KV6 586 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 SPATA17Q96L03 361 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 CASD1Q96PB1 797 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 PGLYRP2Q96PD5 576 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 SORT1Q99523 831 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 SEPT5Q99719 369 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 MRPL57Q9BQC6 102 aaKnown RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 TMEM175Q9BSA9 504 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 ABHD14AQ9BUJ0 271 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 GATA5Q9BWX5 397 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 C1QTNF1Q9BXJ1 281 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 MRPL9Q9BYD2 267 aaKnown RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 DRC3Q9H069 523 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 CLPBQ9H078 707 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 ILKAPQ9H0C8 392 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 C1orf21Q9H246 121 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 RETREG1Q9H6L5 497 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 COG4Q9H9E3 785 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 CAB39LQ9H9S4 337 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 RNPEPL1Q9HAU8 725 aa3.34□□□□□ -1.87
HMGB3P11-201ENST00000440127 NT5MQ9NPB1 228 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms