RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 KLHL35Q6PF15 583 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 UNQ6494/PRO21346Q6UXR6 183 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ARHGAP22Q7Z5H3 698 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 FAM20CQ8IXL6 584 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 LINC01555Q8NAE3 123 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 OR7G3Q8NG95 312 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CLHC1Q8NHS4 586 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 WDR36Q8NI36 951 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SLC13A3Q8WWT9 602 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 STARD8Q92502 1023 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 NXPE2Q96DL1 559 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ASB9Q96DX5 294 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 RNF31Q96EP0 1072 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 MAP3K3Q99759 626 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 DPYSL5Q9BPU6 564 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 AIF1LQ9BQI0 150 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 GPATCH1Q9BRR8 931 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SLC39A3Q9BRY0 314 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 EBPLQ9BY08 206 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 KLHL25Q9H0H3 589 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ACTL8Q9H568 366 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 POLR1BQ9H9Y6 1135 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 S100A14Q9HCY8 104 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 GEMIN8Q9NWZ8 242 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 OCIAD1Q9NX40 245 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ACTR10Q9NZ32 417 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 MAP10Q9P2G4 905 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 EPHA6Q9UF33 1036 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TAC3Q9UHF0 121 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SH2B3Q9UQQ2 575 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 AK5Q9Y6K8 562 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ADAMTS20P59510 1910 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 EPG5Q9HCE0 2579 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 USP24Q9UPU5 2620 aa13.89□□□□□ -0.19
TNFRSF1A-204ENST00000440083 IGHV5-51A0A0C4DH38 117 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ASPDHA6ND91 283 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 EFCAB7A8K855 629 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 MAGEB17A8MXT2 336 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TMX2-CTNND1H3BSU7 103 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PLD2O14939 933 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ANKRD28O15084 1053 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 KCNH1O95259 989 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 BAG2O95816 211 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CHRM5P08912 532 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PVRP15151 417 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SHMT2P34897 504 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 RAB28P51157 221 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 MAPK10P53779 464 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 RPS13P62277 151 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TRAP1Q12931 704 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 BNIP2Q12982 314 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TRA2AQ13595 282 aaKnown RBP eCLIP13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 KCNAB1Q14722 419 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 KIAA0040Q15053 153 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TLR1Q15399 786 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 FAM174BQ3ZCQ3 159 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SLC2A7Q6PXP3 512 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PRSS42Q7Z5A4 293 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SPATA24Q86W54 205 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 FAM129CQ86XR2 697 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 LAS2Q8IYD9 372 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 RNF175Q8N4F7 328 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 DPP10Q8N608 796 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 BHLHE22Q8NFJ8 381 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 HUS1BQ8NHY5 278 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CDC26Q8NHZ8 85 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 FLVCR1-AS1Q8TAF5 88 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ZDHHC12Q96GR4 267 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 FCRL1Q96LA6 429 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 LRGUKQ96M69 825 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TSSK3Q96PN8 268 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 NRSN2Q9GZP1 204 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 RAB33BQ9H082 229 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CLMPQ9H6B4 373 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 RMND5AQ9H871 391 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SLC52A3Q9NQ40 469 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ABCD2Q9UBJ2 740 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 POMT2Q9UKY4 750 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 MAPRE3Q9UPY8 281 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 DLGAP4Q9Y2H0 992 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 AHCTF1Q8WYP5 2266 aa13.88□□□□□ -0.19
TNFRSF1A-204ENST00000440083 FXYD1O00168 92 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 FOXE1O00358 373 aaPredicted RBP13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PRMT3O60678 531 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PRAMEF10O60809 474 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 BCAS2O75934 225 aaPredicted RBP13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TNFSF15O95150 251 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CCNDBP1O95273 360 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ANPEPP15144 967 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 UGT2B7P16662 529 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 SERPINB1P30740 379 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CSTF2P33240 577 aaKnown RBP eCLIP13.87□□□□□ -0.197e-7■□□□□ 8.4
TNFRSF1A-204ENST00000440083 S100A3P33764 101 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 HPCAL1P37235 193 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 ASMTP46597 345 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 CCR8P51685 355 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 DGKQP52824 942 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 PWP1Q13610 501 aa13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 TRIM25Q14258 630 aaKnown RBP13.87□□□□□ -0.19
TNFRSF1A-204ENST00000440083 RTP5Q14D33 572 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms