RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 DNAH1Q9P2D7 4330 aa10.07□□□□□ -0.8
RTN4-211ENST00000438462 VWC2LB2RUY7 222 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 WWP2O00308 870 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 TXNDC9O14530 226 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 F13A1P00488 732 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 CALB1P05937 261 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 CSF3P09919 207 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 SLC6A12P48065 614 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 EEF1A1P68104 462 aaKnown RBP10.06□□□□□ -0.8
RTN4-211ENST00000438462 ZBTB17Q13105 803 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 DPYSL2Q16555 572 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 IFI16Q16666 785 aaKnown RBP10.06□□□□□ -0.8
RTN4-211ENST00000438462 PRAMEF20Q5VT98 475 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 EEF1A1P5Q5VTE0 462 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 SVOPLQ8N434 492 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 CNEP1R1Q8N9A8 125 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 KBTBD8Q8NFY9 601 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 OR2A1Q8NGT9 310 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 ZPLD1Q8TCW7 415 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 BLOC1S5Q8TDH9 187 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 ELMO1Q92556 727 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 PGM2Q96G03 612 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 IMP4Q96G21 291 aaKnown RBP10.06□□□□□ -0.8
RTN4-211ENST00000438462 OR1F2PQ96R84 312 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 CCT8L2Q96SF2 557 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 CEP41Q9BYV8 373 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 GRIP2Q9C0E4 1043 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 SLITRK2Q9H156 845 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 FAM96AQ9H5X1 160 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 ESM1Q9NQ30 184 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 AIPL1Q9NZN9 384 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 PDP1Q9P0J1 537 aaPredicted RBP10.06□□□□□ -0.8
RTN4-211ENST00000438462 SLC39A10Q9ULF5 831 aa10.06□□□□□ -0.8
RTN4-211ENST00000438462 GOLGA6L4A6NEF3 574 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 GOLGA6L9A6NEM1 432 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 KCNK1O00180 336 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 PHF2O75151 1096 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 GCH1P30793 250 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 NR4A2P43354 598 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 SLC14A2Q15849 920 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 BEAN1Q3B7T3 259 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 SYTL3Q4VX76 610 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 ADGRD1Q6QNK2 874 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 CLEC17AQ6ZS10 378 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 DCUN1D3Q8IWE4 304 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 CLDN19Q8N6F1 224 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 SPATA22Q8NHS9 363 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 WNT2BQ93097 391 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 NCLNQ969V3 563 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 TP53INP1Q96A56 240 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 VMP1Q96GC9 406 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 SGCZQ96LD1 299 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 CCDC77Q9BR77 488 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 CLCF1Q9UBD9 225 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 MYOTQ9UBF9 498 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 FKBPLQ9UIM3 349 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 KLHL21Q9UJP4 597 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 HPSEQ9Y251 543 aa10.05□□□□□ -0.8
RTN4-211ENST00000438462 NOTCH3Q9UM47 2321 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 HEATR5BQ9P2D3 2071 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 KRT87PA6NCN2 255 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 ZNF860A6NHJ4 632 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 CCT8L1PA6NM43 557 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 STX7O15400 261 aaKnown RBP10.04□□□□□ -0.8
RTN4-211ENST00000438462 TRAPPC6AO75865 159 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 MYO1DO94832 1006 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 ESR1P03372 595 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 FHP07954 510 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 GSTM1P09488 218 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 PYGBP11216 843 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 CHRNB2P17787 502 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 TPSB2P20231 275 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 TBXA2RP21731 343 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 PTPN3P26045 913 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 CMPK1P30085 196 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 SYKP43405 635 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 KCNC1P48547 511 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 UBA52P62987 128 aaKnown RBP10.04□□□□□ -0.8
RTN4-211ENST00000438462 GSTM4Q03013 218 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 TPSAB1Q15661 275 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 NHSL2Q5HYW2 709 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 ALKBH2Q6NS38 261 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 THSD4Q6ZMP0 1018 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 MON1BQ7L1V2 547 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 KIAA1328Q86T90 577 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 PDSS2Q86YH6 399 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 ZDHHC22Q8N966 263 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 OR5T3Q8NGG3 340 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 UBE2FQ969M7 185 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 TADA1Q96BN2 335 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 ULK4Q96C45 1275 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 PTCHD1Q96NR3 888 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 TSGA13Q96PP4 275 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 ACAT2Q9BWD1 397 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 PCYOX1Q9UHG3 505 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 PRR14LQ5THK1 2151 aa10.04□□□□□ -0.8
RTN4-211ENST00000438462 IGKV1-8A0A0C4DH67 115 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 A0A1W2PPV9 198 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 TCRBV16S1A1N1A0A5B0 115 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 POM121CA8CG34 1229 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms