RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 TP53TG5Q9Y2B4 290 aa16.4■□□□□ 0.22
CTDSP1-203ENST00000431127 ZNF451Q9Y4E5 1061 aa16.4■□□□□ 0.22
CTDSP1-203ENST00000431127 FLNBO75369 2602 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 TLN1Q9Y490 2541 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 LOC102723996A0A087X1L8 192 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 NSG1A0A0A6YYJ2 146 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 OR7A17O14581 309 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 B3GALT2O43825 422 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 TBX6O95947 436 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 B3GALT4O96024 378 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 OTCP00480 354 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 RPS17P08708 135 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 KRT4P19013 534 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 DEKP35659 375 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 MTTPP55157 894 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 OLR1P78380 273 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 MYBPC3Q14896 1274 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 CPSF6Q16630 551 aaKnown RBP eCLIP16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 CCDC153Q494R4 210 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 C10orf62Q5T681 223 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 VWA5B1Q5TIE3 1220 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 FAAH2Q6GMR7 532 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 ADNP2Q6IQ32 1131 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 ABHD17CQ6PCB6 329 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 PLPP5Q8NEB5 264 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 OR2W6PQ8NHA6 318 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 HUS1BQ8NHY5 278 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 ADAMTS18Q8TE60 1221 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 PPP4R1Q8TF05 950 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 ZNF483Q8TF39 744 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 C8orf44Q96CB5 159 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 CCDC126Q96EE4 140 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 F2RL3Q96RI0 385 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 SERINC2Q96SA4 455 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 TBCDQ9BTW9 1192 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 MS4A8Q9BY19 250 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 RIC8BQ9NVN3 520 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 RNF11Q9Y3C5 154 aa16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 HEMK1Q9Y5R4 338 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-203ENST00000431127 SCN3AQ9NY46 2000 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 IGHV1-45A0A0A0MS14 117 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 MAGEB17A8MXT2 336 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 C4orf51C9J302 202 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 COPEO14579 308 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 DLX3O60479 287 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 TGFB1P01137 390 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 COX6A1P12074 109 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 ICAM2P13598 275 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 ITGA3P26006 1051 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 PTX3P26022 381 aaPredicted RBP16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 CRHR1P34998 444 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 PRKAA2P54646 552 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 AP2B1P63010 937 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 RCN2Q14257 317 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 NSDHLQ15738 373 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 KHDRBS2Q5VWX1 349 aaKnown RBP16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 MILR1Q7Z6M3 343 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 OR52B6Q8NGF0 335 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 NSUN5Q96P11 429 aaKnown RBP16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 QRFPRQ96P65 431 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 SMAD5Q99717 465 aaKnown RBP16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 ZNF700Q9H0M5 742 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 ZNF160Q9HCG1 818 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 ZBTB26Q9HCK0 441 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 SEMA4BQ9NPR2 832 aaPredicted RBP16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 LANCL2Q9NS86 450 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 PSD3Q9NYI0 1048 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 C5AR2Q9P296 337 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 LGALS13Q9UHV8 139 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 MED13Q9UHV7 2174 aa16.38■□□□□ 0.21
CTDSP1-203ENST00000431127 A0A0G2JN53 185 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 FOXE1O00358 373 aaPredicted RBP16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 PRMT3O60678 531 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 DNAJB6O75190 326 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 CDC123O75794 336 aaPredicted RBP16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 SUPT7LO94864 414 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 IMPDH1P20839 514 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 TSFMP43897 325 aaKnown RBP16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 ARFIP1P53367 373 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 RHAGQ02094 409 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 EEF1A2Q05639 463 aaKnown RBP16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 DDX39BQ13838 428 aaKnown RBP16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 ABRAXAS2Q15018 415 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 ZRSR2Q15696 482 aaKnown RBP16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 AP5B1Q2VPB7 878 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 GGTA1PQ4G0N0 100 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 ZNF678Q5SXM1 525 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 DEPDC1Q5TB30 811 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 CPEB2Q7Z5Q1 589 aaKnown RBP16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 KBTBD2Q8IY47 623 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 CA13Q8N1Q1 262 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 RDH11Q8TC12 318 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 MTERF1Q99551 399 aaKnown RBP16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 TUBB6Q9BUF5 446 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 TMEM109Q9BVC6 243 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 NUDT9Q9BW91 350 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 RBCK1Q9BYM8 510 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 LHPPQ9H008 270 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 DMRT3Q9NQL9 472 aa16.37■□□□□ 0.21
CTDSP1-203ENST00000431127 PRDM7Q9NQW5 492 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms