RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 SERINC2Q96SA4 455 aa9.24□□□□□ -0.93
HDAC6-207ENST00000430858 LPAR4Q99677 370 aa9.24□□□□□ -0.93
HDAC6-207ENST00000430858 TXLNGYQ9BZA5 131 aa9.24□□□□□ -0.93
HDAC6-207ENST00000430858 ROGDIQ9GZN7 287 aa9.24□□□□□ -0.93
HDAC6-207ENST00000430858 LUZP4Q9P127 313 aa9.24□□□□□ -0.93
HDAC6-207ENST00000430858 PTGFRNQ9P2B2 879 aa9.24□□□□□ -0.93
HDAC6-207ENST00000430858 CPSF2Q9P2I0 782 aaKnown RBP9.24□□□□□ -0.93
HDAC6-207ENST00000430858 FETUBQ9UGM5 382 aa9.24□□□□□ -0.93
HDAC6-207ENST00000430858 ADGRE2Q9UHX3 823 aa9.24□□□□□ -0.93
HDAC6-207ENST00000430858 TMCO1Q9UM00 188 aa9.24□□□□□ -0.93
HDAC6-207ENST00000430858 VPS4AQ9UN37 437 aa9.24□□□□□ -0.93
HDAC6-207ENST00000430858 PLAAQ9Y263 795 aa9.24□□□□□ -0.93
HDAC6-207ENST00000430858 CFAP46Q8IYW2 2715 aa9.24□□□□□ -0.93
HDAC6-207ENST00000430858 TNRC6AQ8NDV7 1962 aaKnown RBP9.23□□□□□ -0.93
HDAC6-207ENST00000430858 IGHV3-20A0A0C4DH32 117 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 DYTNA2CJ06 578 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 STX16-NPEPL1H3BU86 382 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 E2F3O00716 465 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 STX16O14662 325 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 B3GALT2O43825 422 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 UGDHO60701 494 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 B4GALT2O60909 372 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 TBX6O95947 436 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-207ENST00000430858 UQCRHP07919 91 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 FAM153BP0C7A2 387 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 ITGAMP11215 1152 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 PLA2G16P53816 162 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 MTTPP55157 894 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 RAB38P57729 211 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 OR4D2P58180 307 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 ACTN3Q08043 901 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-207ENST00000430858 RUNX2Q13950 521 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 RCN2Q14257 317 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 SLC29A2Q14542 456 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 TLR1Q15399 786 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 BTBD16Q32M84 506 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 FAM153CQ494X1 144 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 TMEM35AQ53FP2 167 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 SFT2D3Q587I9 215 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 LIPJQ5W064 366 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 ADNP2Q6IQ32 1131 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 ABHD17CQ6PCB6 329 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 PAPD4Q6PIY7 484 aaKnown RBP9.23□□□□□ -0.93
HDAC6-207ENST00000430858 TIFABQ6ZNK6 161 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 LINC00696Q6ZRV3 163 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 CHSY3Q70JA7 882 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 SIRT6Q8N6T7 355 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 GALNT11Q8NCW6 608 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 LRRN4CLQ8ND94 238 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 ARMC2Q8NEN0 867 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 OR7G3Q8NG95 312 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 M1APQ8TC57 530 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 ZNF473Q8WTR7 871 aaKnown RBP9.23□□□□□ -0.93
HDAC6-207ENST00000430858 TSLPQ969D9 159 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 SCYL1Q96KG9 808 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 PTCHD1Q96NR3 888 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 QRFPRQ96P65 431 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 KCNC2Q96PR1 638 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 MRPL57Q9BQC6 102 aaKnown RBP9.23□□□□□ -0.93
HDAC6-207ENST00000430858 MRPL46Q9H2W6 279 aaKnown RBP9.23□□□□□ -0.93
HDAC6-207ENST00000430858 ACTR8Q9H981 624 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 COPS7BQ9H9Q2 264 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-207ENST00000430858 PRM3Q9NNZ6 103 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 PRDM9Q9NQV7 894 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 ZNF358Q9NW07 568 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 XPR1Q9UBH6 696 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 TEKT2Q9UIF3 430 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 TSC22D4Q9Y3Q8 395 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 MMACHCQ9Y4U1 282 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 PCDHGA11Q9Y5H2 935 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 NUP210LQ5VU65 1888 aa9.23□□□□□ -0.93
HDAC6-207ENST00000430858 IGKV3D-11A0A0A0MRZ8 115 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 A0A0G2JN53 185 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 IQANK1A0A1B0GTG1 560 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 SYNDIG1LA6NDD5 238 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 FAM227AF5H4B4 570 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 CLDN4O14493 209 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 SMIM24O75264 130 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 SIX3O95343 332 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-207ENST00000430858 CELA2AP08217 269 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 PCNAP12004 261 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 GCAP28676 217 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 EEF1DP29692 281 aaKnown RBP9.22□□□□□ -0.93
HDAC6-207ENST00000430858 PIK3CBP42338 1070 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 ARG2P78540 354 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 BTG2P78543 158 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 PHEXP78562 749 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 GTF2H2Q13888 395 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 ZNF169Q14929 603 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-207ENST00000430858 TEX35Q5T0J7 233 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 ABHD17BQ5VST6 288 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 B3GNTL1Q67FW5 361 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-207ENST00000430858 GTF2H2CQ6P1K8 395 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 GOLGA7Q7Z5G4 137 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 CUZD1Q86UP6 607 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 LCA5Q86VQ0 697 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 MYLK4Q86YV6 388 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-207ENST00000430858 PTGR2Q8N8N7 351 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-207ENST00000430858 HUS1BQ8NHY5 278 aa9.22□□□□□ -0.93
HDAC6-207ENST00000430858 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms