RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 XKR6Q5GH73 641 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 PAGE2BQ5JRK9 111 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 DGKKQ5KSL6 1271 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 ANKRD34AQ69YU3 496 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 C22orf39Q6P5X5 142 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 CCDC81Q6ZN84 652 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 MBOAT1Q6ZNC8 495 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 PLEKHG7Q6ZR37 379 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 CCDC80Q76M96 950 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 ZNF551Q7Z340 670 aaPredicted RBP8.36□□□□□ -1.07
GABPB1-205ENST00000429662 TMEM150AQ86TG1 271 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 TSPAN33Q86UF1 283 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 THOC6Q86W42 341 aaKnown RBP8.36□□□□□ -1.07
GABPB1-205ENST00000429662 ZSWIM9Q86XI8 627 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 NPAS3Q8IXF0 933 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 RAVER1Q8IY67 606 aaKnown RBP8.36□□□□□ -1.07
GABPB1-205ENST00000429662 TRAM1L1Q8N609 369 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 NATD1Q8N6N6 113 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 ARL14EPQ8N8R7 260 aaPredicted RBP8.36□□□□□ -1.07
GABPB1-205ENST00000429662 OR6K2Q8NGY2 324 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 GOT1L1Q8NHS2 421 aaPredicted RBP8.36□□□□□ -1.07
GABPB1-205ENST00000429662 MCFD2Q8NI22 146 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 ZFP90Q8TF47 636 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 C11orf24Q96F05 449 aaPredicted RBP8.36□□□□□ -1.07
GABPB1-205ENST00000429662 CCDC97Q96F63 343 aaPredicted RBP8.36□□□□□ -1.07
GABPB1-205ENST00000429662 C7orf34Q96L11 122 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 FOPNLQ96NB1 174 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 COL21A1Q96P44 957 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 COPS4Q9BT78 406 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 RACGAP1Q9H0H5 632 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 CHST8Q9H2A9 424 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 EHD1Q9H4M9 534 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 RUBCNLQ9H714 662 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 THSD1Q9NS62 852 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 FKBP14Q9NWM8 211 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 CCDC59Q9P031 241 aaKnown RBP8.36□□□□□ -1.07
GABPB1-205ENST00000429662 ATP6V1HQ9UI12 483 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 PSORS1C1Q9UIG5 152 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 FZD4Q9ULV1 537 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 INSL5Q9Y5Q6 135 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 IGSF10Q6WRI0 2623 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 ZNF106Q9H2Y7 1883 aaKnown RBP8.36□□□□□ -1.07
GABPB1-205ENST00000429662 CELSR3Q9NYQ7 3312 aa8.36□□□□□ -1.07
GABPB1-205ENST00000429662 TRAV19A0A0A6YYK7 116 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 PNMA8CA0A1B0GUJ8 204 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 C1orf226A1L170 272 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 SH3D21A4FU49 640 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 ARRDC5A6NEK1 342 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 MGAT4DA6NG13 374 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 CLCA1A8K7I4 914 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 TTC34A8MYJ7 566 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 hCG_2039718K7EN88 272 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 TNFRSF11BO00300 401 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 FOXE1O00358 373 aaPredicted RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 SGTAO43765 313 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 AIREO43918 545 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 SNX4O95219 450 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 KRT75O95678 551 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 FADS2O95864 444 aaKnown RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 RPLP0P05388 317 aaKnown RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 URODP06132 367 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 CDK1P06493 297 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 ASGR2P07307 311 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 C1SP09871 688 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 BMP4P12644 408 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 SERPINB1P30740 379 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 VIPR1P32241 457 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 CTSKP43235 329 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 MASP1P48740 699 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 TMED10P49755 219 aaKnown RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 VBP1P61758 197 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 PRKCDQ05655 676 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 PPP1R8Q12972 351 aaKnown RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 RGNQ15493 299 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 CYP2A13Q16696 494 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 DUSP6Q16828 381 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 TIMM50Q3ZCQ8 353 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 ZNF404Q494X3 552 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 IQCCQ4KMZ1 466 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 TRIM40Q6P9F5 258 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 UNC5DQ6UXZ4 953 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 NCCRP1Q6ZVX7 275 aaPredicted RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 PAGE2Q7Z2X7 111 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 ZNF605Q86T29 641 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 ARMC8Q8IUR7 673 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 ENTHD1Q8IYW4 607 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 C10orf111Q8N326 155 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 DTWD2Q8NBA8 298 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 FBXO15Q8NCQ5 510 aaPredicted RBP8.35□□□□□ -1.07
GABPB1-205ENST00000429662 OR56A3Q8NH54 315 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 NDNFQ8TB73 568 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 WFDC5Q8TCV5 224 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 HCAR2Q8TDS4 363 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 ELMO1Q92556 727 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 MTERF3Q96E29 417 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 TMEM169Q96HH4 297 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 PPP1R16AQ96I34 528 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 LMLNQ96KR4 655 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 ZNF558Q96NG5 402 aa8.35□□□□□ -1.07
GABPB1-205ENST00000429662 P2RY13Q9BPV8 354 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms