RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 A0A1W2PNU3 283 aaPredicted RBP9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 AIM2O14862 343 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 MAP3K7O43318 606 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 DUX1O43812 170 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 PRKNO60260 465 aaPredicted RBP9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 CBFA2T3O75081 653 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 LDOC1O95751 146 aaPredicted RBP9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 ANXA4P09525 319 aaPredicted RBP9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 PRR35P0CG20 571 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 LBPP18428 481 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 GPX3P22352 226 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 PIK3R1P27986 724 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 HOXD12P35452 270 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 MLLT3P42568 568 aaPredicted RBP9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 TAS2R50P59544 299 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 ACSM2AQ08AH3 577 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 CAPRIN1Q14444 709 aaKnown RBP9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 HIST2H2ACQ16777 129 aaPredicted RBP9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 PGS1Q32NB8 556 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 GTDC1Q4AE62 458 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 GGTA1PQ4G0N0 100 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 SPANXN4Q5MJ08 99 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 STPG1Q5TH74 334 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 KHDRBS2Q5VWX1 349 aaKnown RBP9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 ACSM2BQ68CK6 577 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 HIST2H2AA3Q6FI13 130 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 RETREG3Q86VR2 466 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 MCATQ8IVS2 390 aaKnown RBP9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 SCUBE1Q8IWY4 988 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 OR1L3Q8NH93 324 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 MS4A6EQ96DS6 147 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 WDR34Q96EX3 536 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 AURKBQ96GD4 344 aaPredicted RBP9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 ZFYVE21Q9BQ24 234 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 RAB11FIP5Q9BXF6 653 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 LRRN3Q9H3W5 708 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 ZNF385DQ9H6B1 395 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 TMEM184CQ9NVA4 438 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 HCN3Q9P1Z3 774 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 KALRNO60229 2985 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 ITPR1Q14643 2758 aa9.05□□□□□ -0.96
HMGCLL1-206ENST00000428842 LILRA5A6NI73 299 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 FBP2O00757 339 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 PGRMC2O15173 223 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 RGS14O43566 566 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 PCDH7O60245 1069 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 RDH16O75452 317 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 LINGO3P0C6S8 592 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 CPOXP36551 454 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 GRK6P43250 576 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 NHLH1Q02575 133 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 E2F2Q14209 437 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 TRMT5Q32P41 509 aaKnown RBP9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 FAM174BQ3ZCQ3 159 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 ZNF385BQ569K4 471 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 PAGE3Q5JUK9 113 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 FAM199XQ6PEV8 388 aaPredicted RBP9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 SLC2A7Q6PXP3 512 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 KRT78Q8N1N4 520 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 FAM47BQ8NA70 645 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 FAM156AQ8NDB6 213 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 STMN2Q93045 179 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 RCN3Q96D15 328 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 OTUB1Q96FW1 271 aaPredicted RBP9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 OR6C1Q96RD1 312 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 MAPKAP1Q9BPZ7 522 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 DUSP23Q9BVJ7 150 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 DNAAF2Q9NVR5 837 aaKnown RBP9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 GPRC5BQ9NZH0 403 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 USP22Q9UPT9 525 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 LRCH1Q9Y2L9 728 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 NAALAD2Q9Y3Q0 740 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 ATG4BQ9Y4P1 393 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 PCDHGA5Q9Y5G8 931 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 TRBC2A0A5B9 178 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 ANKRD28O15084 1053 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 ABCB1P08183 1280 aaPredicted RBP9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 IL3P08700 152 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 BSGP35613 385 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 GRK3P35626 688 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 HSD17B2P37059 387 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 SSR2P43308 183 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 EFNA3P52797 238 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 ACTR3P61158 418 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 ERVK-8P63133 956 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 DUSP2Q05923 314 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 KLC1Q07866 573 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 RPS6KA2Q15349 733 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 PAGE2BQ5JRK9 111 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 DEPDC1Q5TB30 811 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 LCN10Q6JVE6 187 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 TTLL10Q6ZVT0 673 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 CHSY3Q70JA7 882 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 APLFQ8IW19 511 aaPredicted RBP9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 ULK2Q8IYT8 1036 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 CLECL1Q8IZS7 167 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 CSNK1A1LQ8N752 337 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 SPDL1Q96EA4 605 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 C11orf24Q96F05 449 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms