RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 LAPTM4BQ86VI4 370 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 TMEM151BQ8IW70 566 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 ARHGEF39Q8N4T4 335 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 AMER3Q8N944 861 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 RGMAQ96B86 450 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 CNDP1Q96KN2 507 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 ATP6V1G3Q96LB4 118 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 KCNC2Q96PR1 638 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 CRB3Q9BUF7 120 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 SORBS1Q9BX66 1292 aaKnown RBP13.79□□□□□ -0.2
SGCE-204ENST00000428696 MS4A8Q9BY19 250 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 AICDAQ9GZX7 198 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 EML4Q9HC35 981 aaKnown RBP13.79□□□□□ -0.2
SGCE-204ENST00000428696 ENAMQ9NRM1 1142 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 TRPS1Q9UHF7 1281 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 ZNF225Q9UK10 706 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 MKL2Q9ULH7 1088 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 SLC12A4Q9UP95 1085 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 MAP4K5Q9Y4K4 846 aa13.79□□□□□ -0.2
SGCE-204ENST00000428696 OR2W5A6NFC9 320 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 K7ENP7 123 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 MANBAO00462 879 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 TERTO14746 1132 aaKnown RBP13.78□□□□□ -0.2
SGCE-204ENST00000428696 CNOT3O75175 753 aaKnown RBP13.78□□□□□ -0.2
SGCE-204ENST00000428696 EMP2P54851 167 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 NAA20P61599 178 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 BTKQ06187 659 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 KLC1Q07866 573 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 E2F2Q14209 437 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 ARL13AQ5H913 290 aaPredicted RBP13.78□□□□□ -0.2
SGCE-204ENST00000428696 SPDYAQ5MJ70 313 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 DEPDC1Q5TB30 811 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 NIPAL1Q6NVV3 410 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 MRPL14Q6P1L8 145 aaKnown RBP13.78□□□□□ -0.2
SGCE-204ENST00000428696 ABHD17CQ6PCB6 329 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 INO80CQ6PI98 192 aaPredicted RBP13.78□□□□□ -0.2
SGCE-204ENST00000428696 SHISA5Q8N114 240 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 AFAP1L2Q8N4X5 818 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 SRFBP1Q8NEF9 429 aaKnown RBP13.78□□□□□ -0.2
SGCE-204ENST00000428696 WDR20Q8TBZ3 569 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 AGAP11Q8TF27 550 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 FKBP10Q96AY3 582 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 TLCD1Q96CP7 247 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 MKKSQ9NPJ1 570 aaPredicted RBP13.78□□□□□ -0.2
SGCE-204ENST00000428696 C3orf18Q9UK00 162 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 PCDHGA6Q9Y5G7 932 aa13.78□□□□□ -0.2
SGCE-204ENST00000428696 LAMA5O15230 3695 aa13.77□□□□□ -0.2
SGCE-204ENST00000428696 C4orf51C9J302 202 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 FAM227AF5H4B4 570 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 FOXE1O00358 373 aaPredicted RBP13.77□□□□□ -0.21
SGCE-204ENST00000428696 PEX12O00623 359 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 KLF7O75840 302 aaPredicted RBP13.77□□□□□ -0.21
SGCE-204ENST00000428696 SASH3O75995 380 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 HSPA4LO95757 839 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 TBX6O95947 436 aaPredicted RBP13.77□□□□□ -0.21
SGCE-204ENST00000428696 GBAP04062 536 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 ENO1P06733 434 aaKnown RBP13.77□□□□□ -0.21
SGCE-204ENST00000428696 CHRNGP07510 517 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 FURINP09958 794 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 SMIM10L1P0DMW3 83 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 CERS1P27544 350 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 ETV4P43268 484 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 MTTPP55157 894 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 FOXA1P55317 472 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 IL10RAQ13651 578 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 RUNX2Q13950 521 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 IMPG1Q17R60 797 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 GGTA1PQ4G0N0 100 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 CLEC6AQ6EIG7 209 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 OR4C11Q6IEV9 310 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 CUZD1Q86UP6 607 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 OR2Y1Q8NGV0 311 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 SMIM10Q96HG1 83 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 SERPINI1Q99574 410 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 NMRK1Q9NWW6 199 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 NXT1Q9UKK6 140 aaKnown RBP13.77□□□□□ -0.21
SGCE-204ENST00000428696 SCN3AQ9NY46 2000 aa13.77□□□□□ -0.21
SGCE-204ENST00000428696 SEC16AO15027 2179 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 ARHGAP10A1A4S6 786 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 BIRC5O15392 142 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 NPHS1O60500 1241 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 BMP10O95393 424 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 ETHE1O95571 254 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 BGNP21810 368 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 CDC20Q12834 499 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 SLAMF1Q13291 335 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 RCN2Q14257 317 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 SSPNQ14714 243 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 TTMPQ5BVD1 217 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 CYP20A1Q6UW02 462 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 GPR155Q7Z3F1 870 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 UBE3DQ7Z6J8 389 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 RAB43Q86YS6 212 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 ACOT4Q8N9L9 421 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 TBC1D20Q96BZ9 403 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 SERINC2Q96SA4 455 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 TBCDQ9BTW9 1192 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 TRMOQ9BU70 441 aa13.76□□□□□ -0.21
SGCE-204ENST00000428696 MRPL1Q9BYD6 325 aaKnown RBP13.76□□□□□ -0.21
SGCE-204ENST00000428696 SLC29A3Q9BZD2 475 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms