RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ITIH1P19827 911 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 HIST1H1TP22492 207 aaPredicted RBP7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 ALAS2P22557 587 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 ATP5A1P25705 553 aaKnown RBP7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 BSGP35613 385 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 HPCAL1P37235 193 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 TSPAN7P41732 249 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 AVPR1BP47901 424 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 ARSFP54793 590 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 EMP3P54852 163 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 DIO3P55073 304 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 RAB15P59190 212 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 OLR1P78380 273 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 MC2RQ01718 297 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 EMX2Q04743 252 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 ZNF763Q0D2J5 394 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 TARDBPQ13148 414 aaKnown RBP eCLIP7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 SLAMF1Q13291 335 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 EIF3IQ13347 325 aaKnown RBP7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 IL11RAQ14626 422 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 PTGR1Q14914 329 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 SMU1Q2TAY7 513 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 FAM214AQ32MH5 1076 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 PRAMEF17Q5VTA0 474 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 C1orf189Q5VU69 101 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 YOD1Q5VVQ6 348 aaPredicted RBP7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 GARNL3Q5VVW2 1013 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 IL23RQ5VWK5 629 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 METTL21CQ5VZV1 264 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 PWWP2BQ6NUJ5 590 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 GALNT18Q6P9A2 607 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 ZNF793Q6ZN11 406 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 TTLL10Q6ZVT0 673 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 PRSS41Q7RTY9 318 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 TMPRSS12Q86WS5 348 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 PDSS2Q86YH6 399 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 PARP9Q8IXQ6 854 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 LIX1Q8N485 282 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 DTWD1Q8N5C7 304 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 EFCAB3Q8N7B9 438 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 BMPERQ8N8U9 685 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 ACOT4Q8N9L9 421 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 OR9A4Q8NGU2 314 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 PMEPA1Q969W9 287 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 CLIP3Q96DZ5 547 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 METTL2AQ96IZ6 378 aaKnown RBP7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 TSSK3Q96PN8 268 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 SERINC2Q96SA4 455 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 ZNF717Q9BY31 904 aaPredicted RBP7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 DDX31Q9H8H2 851 aaKnown RBP7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 APMAPQ9HDC9 416 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 LHX9Q9NQ69 397 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 AIG1Q9NVV5 245 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 ASIC5Q9NY37 505 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 HCN3Q9P1Z3 774 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 DHCR7Q9UBM7 475 aaKnown RBP7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 PHF11Q9UIL8 331 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 MCM8Q9UJA3 840 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 ADAM29Q9UKF5 820 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 NAALAD2Q9Y3Q0 740 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 COPG1Q9Y678 874 aaKnown RBP7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 GOLGA4Q13439 2230 aaKnown RBP7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 ASCC3Q8N3C0 2202 aaKnown RBP7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 RALGAPA1Q6GYQ0 2036 aa7.51□□□□□ -1.21
HMGA1P4-201ENST00000428643 CACNA1AO00555 2505 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 H3BMH7 237 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 DSCR3O14972 297 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 AKAP10O43572 662 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 TMPRSS11DO60235 418 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 GALR3O60755 368 aaPredicted RBP7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 CPNE3O75131 537 aaKnown RBP7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 GUCY1B2O75343 617 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 LRATO95237 230 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 MED26O95402 600 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 NTRK1P04629 796 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 HBQ1P09105 142 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 FAM58BPP0C7Q3 252 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 PRPS2P11908 318 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 FGF5P12034 268 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 ACPPP15309 386 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 FBLP22087 321 aaKnown RBP7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 TACR1P25103 407 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 TPP2P29144 1249 aaPredicted RBP7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 ETV5P41161 510 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 TSFMP43897 325 aaKnown RBP7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 ASMTP46597 345 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 ALDH9A1P49189 494 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 ARFIP1P53367 373 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 TAS2R50P59544 299 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 SNRPNP63162 240 aaKnown RBP7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 RAE1P78406 368 aaKnown RBP7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 SHC2P98077 582 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 GABPB1Q06547 395 aaPredicted RBP7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 FAM53BQ14153 422 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 UBAP2LQ14157 1087 aaKnown RBP7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 SQLEQ14534 574 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 SLC9A5Q14940 896 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 KIAA0040Q15053 153 aa7.5□□□□□ -1.21
HMGA1P4-201ENST00000428643 GSTA3Q16772 222 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms