RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 RTCAO00442 366 aaKnown RBP12.82□□□□□ -0.36
SNX3-204ENST00000426155 E2F3O00716 465 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 ALPPP05187 535 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 ITGAMP11215 1152 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 MAOAP21397 527 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 CERS1P27544 350 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 CASP2P42575 452 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 HNRNPFP52597 415 aaKnown RBP12.82□□□□□ -0.36
SNX3-204ENST00000426155 DDX39BQ13838 428 aaKnown RBP12.82□□□□□ -0.36
SNX3-204ENST00000426155 GTF2H2Q13888 395 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 PCBP2Q15366 365 aaKnown RBP eCLIP12.82□□□□□ -0.36
SNX3-204ENST00000426155 TBCCQ15814 346 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 ADPRMQ3LIE5 342 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 SFT2D3Q587I9 215 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 IRAK1BP1Q5VVH5 260 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 B3GNTL1Q67FW5 361 aaPredicted RBP12.82□□□□□ -0.36
SNX3-204ENST00000426155 GRHL2Q6ISB3 625 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 GTF2H2CQ6P1K8 395 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 CPEB2Q7Z5Q1 589 aaKnown RBP12.82□□□□□ -0.36
SNX3-204ENST00000426155 KBTBD2Q8IY47 623 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 FAM47BQ8NA70 645 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 TMEM52Q8NDY8 209 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 ZNF473Q8WTR7 871 aaKnown RBP12.82□□□□□ -0.36
SNX3-204ENST00000426155 UBLCP1Q8WVY7 318 aaPredicted RBP12.82□□□□□ -0.36
SNX3-204ENST00000426155 PSMF1Q92530 271 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 VPS50Q96JG6 964 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 QRFPRQ96P65 431 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 CDK15Q96Q40 435 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 CSF3RQ99062 836 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 MS4A8Q9BY19 250 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 REXO4Q9GZR2 422 aaKnown RBP12.82□□□□□ -0.36
SNX3-204ENST00000426155 C5AR2Q9P296 337 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 PTGFRNQ9P2B2 879 aa12.82□□□□□ -0.36
SNX3-204ENST00000426155 PSMC3IPQ9P2W1 217 aaPredicted RBP12.82□□□□□ -0.36
SNX3-204ENST00000426155 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.82□□□□□ -0.36
SNX3-204ENST00000426155 V9GYY5 206 aaPredicted RBP12.82□□□□□ -0.36
SNX3-204ENST00000426155 CNTRLQ7Z7A1 2325 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 SMIM23A6NLE4 172 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 TTLL8A6PVC2 850 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 OR7A17O14581 309 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 WISP1O95388 367 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 F10P00742 488 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 TGFB1P01137 390 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 SERPINA7P05543 415 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 RBP1P09455 135 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 RNH1P13489 461 aaKnown RBP12.81□□□□□ -0.36
SNX3-204ENST00000426155 GSTM2P28161 218 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 TNFRSF8P28908 595 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 SLCO1A2P46721 670 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 PIK3CGP48736 1102 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 ST13P50502 369 aaKnown RBP12.81□□□□□ -0.36
SNX3-204ENST00000426155 VSNL1P62760 191 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 SKP1P63208 163 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 FOXK1P85037 733 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 LAPTM5Q13571 262 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 NSDHLQ15738 373 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 TSNAXIP1Q2TAA8 658 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 PLEKHN1Q494U1 663 aaPredicted RBP12.81□□□□□ -0.36
SNX3-204ENST00000426155 PAGE2BQ5JRK9 111 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 AGAP7PQ5VUJ5 663 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 MED27Q6P2C8 311 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 TRIM40Q6P9F5 258 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 ABHD17CQ6PCB6 329 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 ZNF793Q6ZN11 406 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 UBE3DQ7Z6J8 389 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 LAS2Q8IYD9 372 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 TMEM151AQ8N4L1 468 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 OR2L5Q8NG80 312 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 OR7G3Q8NG95 312 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 OR52B6Q8NGF0 335 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 MZB1Q8WU39 189 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 FAR2Q96K12 515 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 IMMP1LQ96LU5 166 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 MAGEB10Q96LZ2 347 aaPredicted RBP12.81□□□□□ -0.36
SNX3-204ENST00000426155 AGAP4Q96P64 663 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 TUBB6Q9BUF5 446 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 SORBS1Q9BX66 1292 aaKnown RBP12.81□□□□□ -0.36
SNX3-204ENST00000426155 PITHD1Q9GZP4 211 aaPredicted RBP12.81□□□□□ -0.36
SNX3-204ENST00000426155 IPPKQ9H8X2 491 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 ACTR8Q9H981 624 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 NECTIN3Q9NQS3 549 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 TMEM216Q9P0N5 145 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 PCTPQ9UKL6 214 aa12.81□□□□□ -0.36
SNX3-204ENST00000426155 A0A1B0GTL3 188 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 CCDC189A1A4V9 331 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 A8MT66 165 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 MAGEB17A8MXT2 336 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 TGFBR3LH3BV60 316 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 COL6A2P12110 1019 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 TSPAN8P19075 237 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 JAK1P23458 1154 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 PPP2R1BP30154 601 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 SOX11P35716 441 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 CPSF6Q16630 551 aaKnown RBP eCLIP12.8□□□□□ -0.36
SNX3-204ENST00000426155 HIST2H2ACQ16777 129 aaPredicted RBP12.8□□□□□ -0.36
SNX3-204ENST00000426155 BTBD16Q32M84 506 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 FCRLBQ6BAA4 426 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 HIST2H2AA3Q6FI13 130 aa12.8□□□□□ -0.36
SNX3-204ENST00000426155 PAPD4Q6PIY7 484 aaKnown RBP12.8□□□□□ -0.36
SNX3-204ENST00000426155 IGFL3Q6UXB1 125 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms