RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 RUNX2Q13950 521 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 E2F2Q14209 437 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 WHAMMP3Q1A5X7 153 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 XKR6Q5GH73 641 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 TBC1D1Q86TI0 1168 aaPredicted RBP20.2■□□□□ 0.82
CDCP1-202ENST00000425231 BEST3Q8N1M1 668 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 SNX31Q8N9S9 440 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 ELP5Q8TE02 316 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 CCT6BQ92526 530 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 EXT2Q93063 718 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 NXNL1Q96CM4 212 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 QRFPRQ96P65 431 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 RHBGQ9H310 441 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 NMRAL1Q9HBL8 299 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 NECTIN3Q9NQS3 549 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 PRDM9Q9NQV7 894 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 OLAHQ9NV23 265 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 SLC5A6Q9Y289 635 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 ZGRF1Q86YA3 2104 aa20.2■□□□□ 0.82
CDCP1-202ENST00000425231 A0A0G2JN53 185 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 TCRBV16S1A1N1A0A5B0 115 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 ANKDD1BA6NHY2 528 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 PSMD12O00232 456 aaPredicted RBP20.19■□□□□ 0.82
CDCP1-202ENST00000425231 ERI3O43414 337 aaKnown RBP20.19■□□□□ 0.82
CDCP1-202ENST00000425231 CCNT2O60583 730 aaKnown RBP20.19■□□□□ 0.82
CDCP1-202ENST00000425231 PRAMEF2O60811 474 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 LDLRP01130 860 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 MEP1AQ16819 746 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 UBAP2Q5T6F2 1119 aaKnown RBP20.19■□□□□ 0.82
CDCP1-202ENST00000425231 FAR2Q96K12 515 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 EFCAB11Q9BUY7 163 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 NPLQ9BXD5 320 aaPredicted RBP20.19■□□□□ 0.82
CDCP1-202ENST00000425231 NUDT4Q9NZJ9 180 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 PLEKHB1Q9UF11 243 aaPredicted RBP20.19■□□□□ 0.82
CDCP1-202ENST00000425231 ACOT9Q9Y305 439 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 MAST4O15021 2626 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 KERAO60938 352 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 S100BP04271 92 aaPredicted RBP20.19■□□□□ 0.82
CDCP1-202ENST00000425231 MTHFD2P13995 350 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 CASP2P42575 452 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 TDGF1P3P51864 188 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 TUBA3CQ13748 450 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 TBCCQ15814 346 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 MROH9Q5TGP6 573 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 TUBA3EQ6PEY2 450 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 RELL1Q8IUW5 271 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 CENPLQ8N0S6 344 aaPredicted RBP20.19■□□□□ 0.82
CDCP1-202ENST00000425231 MMGT1Q8N4V1 131 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 NFAM1Q8NET5 270 aaPredicted RBP20.19■□□□□ 0.82
CDCP1-202ENST00000425231 OR2L5Q8NG80 312 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 SUN3Q8TAQ9 357 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 MRRFQ96E11 262 aaKnown RBP20.19■□□□□ 0.82
CDCP1-202ENST00000425231 REXO4Q9GZR2 422 aaKnown RBP20.19■□□□□ 0.82
CDCP1-202ENST00000425231 NINJ2Q9NZG7 142 aa20.19■□□□□ 0.82
CDCP1-202ENST00000425231 DMGDHQ9UI17 866 aaKnown RBP20.19■□□□□ 0.82
CDCP1-202ENST00000425231 UBXN8O00124 270 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 C2P06681 752 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 CD96P40200 585 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 ST13P50502 369 aaKnown RBP20.18■□□□□ 0.82
CDCP1-202ENST00000425231 PLA2G16P53816 162 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 IRF9Q00978 393 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 CHIT1Q13231 466 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 LAPTM5Q13571 262 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 BMPR2Q13873 1038 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 ABHD17CQ6PCB6 329 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 LRRC70Q7Z2Q7 622 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 CYP4X1Q8N118 509 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 KIF2BQ8N4N8 673 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 SLC5A8Q8N695 610 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 KCTD4Q8WVF5 259 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 NR4A3Q92570 626 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 SIGLEC12Q96PQ1 595 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 MMACHCQ9Y4U1 282 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 CLDN16Q9Y5I7 305 aa20.18■□□□□ 0.82
CDCP1-202ENST00000425231 NAV2Q8IVL1 2488 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 SAGE2PA6NJ88 616 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 SUPT3HB4E1H0 165 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 SUPT3HO75486 399 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 RASAL1O95294 804 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 MYBL2P10244 700 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 IRF8Q02556 426 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 PCDH1Q08174 1060 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 CCDC91Q7Z6B0 441 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 SCUBE1Q8IWY4 988 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 LGI4Q8N135 537 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 NOA1Q8NC60 698 aaKnown RBP20.17■□□□□ 0.82
CDCP1-202ENST00000425231 MDS2Q8NDY4 140 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 RHEBL1Q8TAI7 183 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 UBTD2Q8WUN7 234 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 C5orf34Q96MH7 638 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 PRDM7Q9NQW5 492 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 SNX15Q9NRS6 342 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 ANKRD10Q9NXR5 420 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 OSGIN2Q9Y236 505 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 PCDHGB6Q9Y5F9 930 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 DOPEY1Q5JWR5 2465 aa20.17■□□□□ 0.82
CDCP1-202ENST00000425231 A0A087X1B8 175 aa20.16■□□□□ 0.82
CDCP1-202ENST00000425231 K7EPI3 171 aa20.16■□□□□ 0.82
CDCP1-202ENST00000425231 B3GALT2O43825 422 aa20.16■□□□□ 0.82
CDCP1-202ENST00000425231 HPDP32754 393 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms