RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 OR52E8Q6IFG1 317 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 GAGE2AQ6NT46 116 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 CGB2Q6NT52 195 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 LRRC74BQ6ZQY2 392 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 NLRP9Q7RTR0 991 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 HAUS6Q7Z4H7 955 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 NET1Q7Z628 596 aaPredicted RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 DEFB132Q7Z7B7 95 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 CATSPER3Q86XQ3 398 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 KIRREL3Q8IZU9 778 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 LRRC43Q8N309 656 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 MCUQ8NE86 351 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 DMBX1Q8NFW5 382 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 RDM1Q8NG50 284 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 OLIG1Q8TAK6 271 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 GDAP1Q8TB36 358 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 RAB3IL1Q8TBN0 382 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 CCDC110Q8TBZ0 833 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 ZNF564Q8TBZ8 553 aaPredicted RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 MGARPQ8TDB4 240 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 PRPF31Q8WWY3 499 aaKnown RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 TEKT1Q969V4 418 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 AZIN2Q96A70 460 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 SLC22A18Q96BI1 424 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 OPTNQ96CV9 577 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 OXNAD1Q96HP4 312 aaPredicted RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 ABHD8Q96I13 439 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 NSL1Q96IY1 281 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 RBM41Q96IZ5 413 aaKnown RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 RMDN2Q96LZ7 410 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 ZNF583Q96ND8 569 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 EPYCQ99645 322 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 SPATA16Q9BXB7 569 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 GPR88Q9GZN0 384 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 SPATC1LQ9H0A9 340 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 C1orf21Q9H246 121 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 SEMA6AQ9H2E6 1030 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 TRABDQ9H4I3 376 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 Q9H521 79 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 DENND2DQ9H6A0 471 aaPredicted RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 ZWILCHQ9H900 591 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 PSTPIP2Q9H939 334 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 PARVGQ9HBI0 331 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 TRPC7Q9HCX4 862 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 MRPL47Q9HD33 250 aaKnown RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 PDE7BQ9NP56 450 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 AGPAT3Q9NRZ7 376 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 DMAC2Q9NW81 257 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 NMRK1Q9NWW6 199 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 TAS2R14Q9NYV8 317 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 NINJ2Q9NZG7 142 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 TBC1D7Q9P0N9 293 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 THEGQ9P2T0 379 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 PSMC3IPQ9P2W1 217 aaPredicted RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 GAGE2DQ9UEU5 116 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 CHORDC1Q9UHD1 332 aaPredicted RBP2.51□□□□□ -2.01
VPS41-206ENST00000418457 HACL1Q9UJ83 578 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 ZNF148Q9UQR1 794 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 CHKBQ9Y259 395 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 RABGAP1Q9Y3P9 1069 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 YIPF1Q9Y548 306 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 RPS6KL1Q9Y6S9 549 aa2.51□□□□□ -2.01
VPS41-206ENST00000418457 MYH14Q7Z406 1995 aaKnown RBP2.5□□□□□ -2.01
VPS41-206ENST00000418457 ZNFX1Q9P2E3 1918 aaKnown RBP2.5□□□□□ -2.01
VPS41-206ENST00000418457 GAKO14976 1311 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 CLUHO75153 1309 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 BRWD3Q6RI45 1802 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 TAF1LQ8IZX4 1826 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 IGLV5-45A0A087WSX0 123 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 A0A0G2JNG1 304 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 IQANK1A0A1B0GTG1 560 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 SIGLEC16A6NMB1 481 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 IFITM10A6NMD0 228 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 H0YIN7 160 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 DNALI1O14645 258 aaPredicted RBP2.5□□□□□ -2.01
VPS41-206ENST00000418457 SYNGR3O43761 229 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 EDIL3O43854 480 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 TYROBPO43914 113 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 ENTPD5O75356 428 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 MED24O75448 989 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 WISP2O76076 250 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 ZNF432O94892 652 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 PROSCO94903 275 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 PGM3O95394 542 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 GH1P01241 217 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 IGHV4-39P01824 125 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 CRYAAP02489 173 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 TFAP2AP05549 437 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 LYNP07948 512 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 PABPC4LP0CB38 370 aaKnown RBP2.5□□□□□ -2.01
VPS41-206ENST00000418457 GOLGA8HP0CJ92 632 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 DLATP10515 647 aaKnown RBP2.5□□□□□ -2.01
VPS41-206ENST00000418457 VPREB1P12018 145 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 CSF2RAP15509 400 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 CA4P22748 312 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 IVDP26440 423 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 CRABP2P29373 138 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 FOXN2P32314 431 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 NNMTP40261 264 aa2.5□□□□□ -2.01
VPS41-206ENST00000418457 BTDP43251 543 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms