RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ZNF19P17023 458 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 SSTR4P31391 388 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 PREPP48147 710 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 NPRL3Q12980 569 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 KCNJ8Q15842 424 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 IER5LQ5T953 404 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 DESI1Q6ICB0 168 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 HSDL2Q6YN16 418 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 C9orf43Q8TAL5 461 aaPredicted RBP12.45□□□□□ -0.42
SCN1B-202ENST00000415950 UBE2FQ969M7 185 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 C12orf66Q96MD2 445 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 DUS2Q9NX74 493 aaKnown RBP12.45□□□□□ -0.42
SCN1B-202ENST00000415950 MAFFQ9ULX9 164 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 IGKV6D-21A0A0A0MT36 114 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 A0A0G2JLL6 359 aaPredicted RBP12.45□□□□□ -0.42
SCN1B-202ENST00000415950 K7ERQ8 282 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 SNAI1O95863 264 aaPredicted RBP12.45□□□□□ -0.42
SCN1B-202ENST00000415950 SLC35G6P0C7Q6 338 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 CD97P48960 835 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 RPS26P62854 115 aaKnown RBP12.45□□□□□ -0.42
SCN1B-202ENST00000415950 EMX1Q04741 257 aaPredicted RBP12.45□□□□□ -0.42
SCN1B-202ENST00000415950 CDK5R2Q13319 367 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 MAB21L1Q13394 359 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 SERINC3Q13530 473 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 TAZQ16635 292 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 PRAMEF17Q5VTA0 474 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 CEACAM20Q6UY09 585 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 PRRT2Q7Z6L0 340 aaPredicted RBP12.45□□□□□ -0.42
SCN1B-202ENST00000415950 GALNT13Q8IUC8 556 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 FUNDC1Q8IVP5 155 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 DNAJA4Q8WW22 397 aaPredicted RBP12.45□□□□□ -0.42
SCN1B-202ENST00000415950 OR51E2Q9H255 320 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 CENPMQ9NSP4 180 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 TAS2R9Q9NYW1 312 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 HK1P19367 917 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 HTR7P34969 479 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 ZNF81P51508 661 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 PPP3R1P63098 170 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 HYAL2Q12891 473 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 PUM1Q14671 1186 aaKnown RBP eCLIP12.45□□□□□ -0.42
SCN1B-202ENST00000415950 HMBOX1Q6NT76 420 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 OTOP2Q7RTS6 562 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 RNF175Q8N4F7 328 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 KLHL36Q8N4N3 616 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 ASCC1Q8N9N2 400 aaKnown RBP12.45□□□□□ -0.42
SCN1B-202ENST00000415950 ZNF431Q8TF32 576 aaPredicted RBP12.45□□□□□ -0.42
SCN1B-202ENST00000415950 TEX37Q96LM6 180 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 ZNF69Q9UC07 566 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 FBXL21Q9UKT6 434 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 OAZ2O95190 189 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 RB1P06400 928 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 CELP19835 753 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 PTX3P26022 381 aaPredicted RBP12.45□□□□□ -0.42
SCN1B-202ENST00000415950 GSTM2P28161 218 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 GRK6P43250 576 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 MVKQ03426 396 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 HNRNPA0Q13151 305 aaKnown RBP12.45□□□□□ -0.42
SCN1B-202ENST00000415950 SLITRK4Q8IW52 837 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 SYNPOQ8N3V7 929 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 SLC25A36Q96CQ1 311 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 DEFB118Q96PH6 123 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 MGME1Q9BQP7 344 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 TP63Q9H3D4 680 aaPredicted RBP12.45□□□□□ -0.42
SCN1B-202ENST00000415950 IFT46Q9NQC8 304 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 TMED5Q9Y3A6 229 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 PCDHB14Q9Y5E9 798 aa12.45□□□□□ -0.42
SCN1B-202ENST00000415950 UBFD1O14562 309 aaKnown RBP12.44□□□□□ -0.42
SCN1B-202ENST00000415950 GJB5O95377 273 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 ADH1CP00326 375 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 LHCGRP22888 699 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 MAGEA2P43356 314 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 ARFRP1Q13795 201 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 GRM2Q14416 872 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 ZFAND4Q86XD8 727 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 ALPK1Q96QP1 1244 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 TNFRSF12AQ9NP84 129 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 ALS2Q96Q42 1657 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 LAMB4A4D0S4 1761 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 GLOD5A6NK44 160 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 ZNF487B1APH4 448 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 AKAP8O43823 692 aaKnown RBP12.44□□□□□ -0.42
SCN1B-202ENST00000415950 C6orf47O95873 294 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 PDYNP01213 254 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 IFNA7P01567 189 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 ALPPP05187 535 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 C8orf89P0DMQ9 161 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 CD72P21854 359 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 OR3A3P47888 321 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 OR3A2P47893 321 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 PPP5CP53041 499 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 SP3Q02447 781 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 TBPL2Q6SJ96 375 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 SH2D5Q6ZV89 423 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 TICAM1Q8IUC6 712 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 TM9SF2Q99805 663 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 MMP27Q9H306 513 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 FAM124BQ9H5Z6 455 aaPredicted RBP12.44□□□□□ -0.42
SCN1B-202ENST00000415950 TREM1Q9NP99 234 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 ZNF639Q9UID6 485 aa12.44□□□□□ -0.42
SCN1B-202ENST00000415950 POFUT2Q9Y2G5 429 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms