RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 TRAF6Q9Y4K3 522 aa12.94□□□□□ -0.34
CPNE1-209ENST00000415920 CROCCQ5TZA2 2017 aa12.94□□□□□ -0.34
CPNE1-209ENST00000415920 A0A0G2JN53 185 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 SAP18O00422 153 aaKnown RBP12.93□□□□□ -0.34
CPNE1-209ENST00000415920 TXNDC9O14530 226 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 ERI3O43414 337 aaKnown RBP12.93□□□□□ -0.34
CPNE1-209ENST00000415920 SRPX2O60687 465 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-209ENST00000415920 ULK1O75385 1050 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 SCRG1O75711 98 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 STK17BO94768 372 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 TIAF1O95411 115 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 TGFB1P01137 390 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 ZNF888P0CJ79 500 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-209ENST00000415920 ZNF28P17035 718 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 HNRNPH1P31943 449 aaKnown RBP12.93□□□□□ -0.34
CPNE1-209ENST00000415920 PIK3CBP42338 1070 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 STXBP1P61764 594 aaKnown RBP12.93□□□□□ -0.34
CPNE1-209ENST00000415920 GNGT1P63211 74 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 CSTF3Q12996 717 aaKnown RBP12.93□□□□□ -0.34
CPNE1-209ENST00000415920 PWP1Q13610 501 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 GRM7Q14831 915 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 ABRAXAS2Q15018 415 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 C10orf62Q5T681 223 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-209ENST00000415920 CEACAM20Q6UY09 585 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 METTL27Q8N6F8 245 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-209ENST00000415920 KCT2Q8NC54 265 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 OR8K5Q8NH50 307 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 CREB3L4Q8TEY5 395 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 STARD8Q92502 1023 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 C19orf60Q96EN9 201 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 CMTM7Q96FZ5 175 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 SEC16BQ96JE7 1060 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 C10orf90Q96M02 699 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 CENPKQ9BS16 269 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 NDC1Q9BTX1 674 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 ACPTQ9BZG2 426 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 OR51B5Q9H339 312 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 CCDC134Q9H6E4 229 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 COPS7BQ9H9Q2 264 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-209ENST00000415920 TXLNGQ9NUQ3 528 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 FGFR1OP2Q9NVK5 253 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 NDOR1Q9UHB4 597 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 HAO1Q9UJM8 370 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 TUBD1Q9UJT1 453 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 SRPK3Q9UPE1 567 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-209ENST00000415920 DNAJC15Q9Y5T4 150 aa12.93□□□□□ -0.34
CPNE1-209ENST00000415920 URADA6NGE7 173 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 C4orf51C9J302 202 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 ZNF749O43361 778 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 EDF1O60869 148 aaKnown RBP12.92□□□□□ -0.34
CPNE1-209ENST00000415920 ETHE1O95571 254 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 DLGAP3O95886 979 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 JUNP05412 331 aaKnown RBP12.92□□□□□ -0.34
CPNE1-209ENST00000415920 SERPINA6P08185 405 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 FURINP09958 794 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 LINC00032P0C843 101 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 FGF5P12034 268 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 IL1RNP18510 177 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 RAB8AP61006 207 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 HMGCS1Q01581 520 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 BTKQ06187 659 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 IL11RAQ14626 422 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 NR6A1Q15406 480 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 NDUFA9Q16795 377 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 PRTGQ2VWP7 1150 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 PRAMEF17Q5VTA0 474 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 KHDRBS2Q5VWX1 349 aaKnown RBP12.92□□□□□ -0.34
CPNE1-209ENST00000415920 PWWP2BQ6NUJ5 590 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 TLDC1Q6P9B6 456 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 TRIM40Q6P9F5 258 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 ABHD13Q7L211 337 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 PIWIL2Q8TC59 973 aaKnown RBP12.92□□□□□ -0.34
CPNE1-209ENST00000415920 GAL3ST3Q96A11 431 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 CLIP3Q96DZ5 547 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 THOC1Q96FV9 657 aaKnown RBP12.92□□□□□ -0.34
CPNE1-209ENST00000415920 ZNF285Q96NJ3 590 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 F2RL3Q96RI0 385 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 C17orf62Q9BQA9 187 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 NUF2Q9BZD4 464 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 ULBP3Q9BZM4 244 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 SLC6A16Q9GZN6 736 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 REXO4Q9GZR2 422 aaKnown RBP12.92□□□□□ -0.34
CPNE1-209ENST00000415920 ACTR5Q9H9F9 607 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-209ENST00000415920 BRF2Q9HAW0 419 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 CUTCQ9NTM9 273 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 MRPS2Q9Y399 296 aaKnown RBP12.92□□□□□ -0.34
CPNE1-209ENST00000415920 TSC22D4Q9Y3Q8 395 aa12.92□□□□□ -0.34
CPNE1-209ENST00000415920 TMEM184BQ9Y519 407 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-209ENST00000415920 NBPF19A0A087WUL8 3843 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 HYKKA2RU49 373 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 ZNF860A6NHJ4 632 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 FOXE1O00358 373 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-209ENST00000415920 RGS14O43566 566 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 CPNE3O75131 537 aaKnown RBP12.91□□□□□ -0.34
CPNE1-209ENST00000415920 KIAA0754O94854 1291 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 FGF4P08620 206 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 HSD3B1P14060 373 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 HSD3B2P26439 372 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 SSR2P43308 183 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms