RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 PPIL1Q9Y3C6 166 aa12.73□□□□□ -0.37
HNF4A-204ENST00000415691 SIT1Q9Y3P8 196 aa12.73□□□□□ -0.37
HNF4A-204ENST00000415691 BPTFQ12830 3046 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 BDP1A6H8Y1 2624 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 TSPAN11A1L157 253 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 CHURC1-FNTBB4DL54 471 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 AP3D1O14617 1153 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 CD3EAPO15446 510 aaKnown RBP12.72□□□□□ -0.37
HNF4A-204ENST00000415691 TRIM3O75382 744 aaPredicted RBP12.72□□□□□ -0.37
HNF4A-204ENST00000415691 PAPSS2O95340 614 aaPredicted RBP12.72□□□□□ -0.37
HNF4A-204ENST00000415691 UROSP10746 265 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 PRKACGP22612 351 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 ITGB7P26010 798 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 KRT20P35900 424 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 MAGEA2P43356 314 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 GNPDA1P46926 289 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 RFX2P48378 723 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 POLR2LP62875 67 aaKnown RBP12.72□□□□□ -0.37
HNF4A-204ENST00000415691 SIGLEC14Q08ET2 396 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 TNK1Q13470 666 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 ZNF789Q5FWF6 425 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 CPZQ66K79 652 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 CREB3L2Q70SY1 520 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 CYP4Z1Q86W10 505 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 HDDC3Q8N4P3 179 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 BRSK1Q8TDC3 778 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 PPM1MQ96MI6 270 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 C1QTNF3Q9BXJ4 246 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 TFB2MQ9H5Q4 396 aaKnown RBP12.72□□□□□ -0.37
HNF4A-204ENST00000415691 BPIFA1Q9NP55 256 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 B4GALT6Q9UBX8 382 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 KLK4Q9Y5K2 254 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 A0A1W2PP55 124 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 ELOVL7A1L3X0 281 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 UPK3BL1B0FP48 263 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 UPK3BL2E5RIL1 263 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 C1QTNF3-AMACRE9PGA6 284 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 E9PQ18 207 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 ANKRD28O15084 1053 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 SPINT1O43278 529 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 ARHGEF9O43307 516 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 CRCPO75575 148 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 RECQL5O94762 991 aaPredicted RBP12.72□□□□□ -0.37
HNF4A-204ENST00000415691 SIX3O95343 332 aaPredicted RBP12.72□□□□□ -0.37
HNF4A-204ENST00000415691 GABRG2P18507 467 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 NDUFV2P19404 249 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 LHCGRP22888 699 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 P2RY2P41231 377 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 SUOXP51687 545 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 CTAG1AP78358 180 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 TIGD6Q17RP2 521 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 TMEM31Q5JXX7 168 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 FAM46CQ5VWP2 391 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 ZNF776Q68DI1 518 aaPredicted RBP12.72□□□□□ -0.37
HNF4A-204ENST00000415691 CYP20A1Q6UW02 462 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 RFLNAQ6ZTI6 216 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 SYT13Q7L8C5 426 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 GLT6D1Q7Z4J2 308 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 SYVN1Q86TM6 617 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 CILP2Q8IUL8 1156 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 OR13C4Q8NGS5 318 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 HMGB4Q8WW32 186 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 CLDN23Q96B33 292 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 CITED4Q96RK1 184 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 ATOH8Q96SQ7 321 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 ZNF556Q9HAH1 456 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 PLCXD1Q9NUJ7 323 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 KLHL21Q9UJP4 597 aa12.72□□□□□ -0.37
HNF4A-204ENST00000415691 MROH6A6NGR9 719 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 CXCR6O00574 342 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 PDPK1O15530 556 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 NOS1APO75052 506 aaPredicted RBP12.71□□□□□ -0.37
HNF4A-204ENST00000415691 ALPPP05187 535 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 ADRB3P13945 408 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 FDXRP22570 491 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 XPAP23025 273 aaPredicted RBP12.71□□□□□ -0.37
HNF4A-204ENST00000415691 CDKN2DP55273 166 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 PTSQ03393 145 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 FAPQ12884 760 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 SYT16Q17RD7 645 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 ERN2Q76MJ5 926 aaKnown RBP12.71□□□□□ -0.37
HNF4A-204ENST00000415691 DET1Q7L5Y6 550 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 GTF2H4Q92759 462 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 SNAPC3Q92966 411 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 PEX13Q92968 403 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 FAM162AQ96A26 154 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 SIPA1Q96FS4 1042 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 NSUN5Q96P11 429 aaKnown RBP12.71□□□□□ -0.37
HNF4A-204ENST00000415691 MCCC1Q96RQ3 725 aaPredicted RBP12.71□□□□□ -0.37
HNF4A-204ENST00000415691 B3GNT4Q9C0J1 378 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 ROGDIQ9GZN7 287 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 MFSD1Q9H3U5 465 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 DYRK4Q9NR20 520 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 B3GNT2Q9NY97 397 aa12.71□□□□□ -0.37
HNF4A-204ENST00000415691 SNTNA6NMZ2 147 aa12.71□□□□□ -0.38
HNF4A-204ENST00000415691 BET1O15155 118 aa12.71□□□□□ -0.38
HNF4A-204ENST00000415691 STX7O15400 261 aaKnown RBP12.71□□□□□ -0.38
HNF4A-204ENST00000415691 TMCC2O75069 709 aa12.71□□□□□ -0.38
HNF4A-204ENST00000415691 RPS17P08708 135 aaKnown RBP12.71□□□□□ -0.38
HNF4A-204ENST00000415691 C5AR1P21730 350 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms