RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 ACAD11Q709F0 780 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 ABHD13Q7L211 337 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 PRSS41Q7RTY9 318 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 NUDT13Q86X67 352 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 PPP1R3BQ86XI6 285 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 GALNT15Q8N3T1 639 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 CPSF7Q8N684 471 aaKnown RBP12.6□□□□□ -0.39
CNN3-203ENST00000415017 ACOT4Q8N9L9 421 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 SLC38A9Q8NBW4 561 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 WDR36Q8NI36 951 aaKnown RBP12.6□□□□□ -0.39
CNN3-203ENST00000415017 CCT6BQ92526 530 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 PPP1R36Q96LQ0 422 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 LRFN5Q96NI6 719 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 SERINC2Q96SA4 455 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 C17orf62Q9BQA9 187 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 ZPBPQ9BS86 351 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 NPLQ9BXD5 320 aaPredicted RBP12.6□□□□□ -0.39
CNN3-203ENST00000415017 MYLK2Q9H1R3 596 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 ACTL8Q9H568 366 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 CUTCQ9NTM9 273 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 AIG1Q9NVV5 245 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 TMEM45AQ9NWC5 275 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 KCMF1Q9P0J7 381 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 WBP11Q9Y2W2 641 aaKnown RBP12.6□□□□□ -0.39
CNN3-203ENST00000415017 ASB4Q9Y574 426 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 CROCCQ5TZA2 2017 aa12.6□□□□□ -0.39
CNN3-203ENST00000415017 CCDC88CQ9P219 2028 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 PMS2P1A4D2B8 440 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 H0YIG0 161 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 SAP18O00422 153 aaKnown RBP12.59□□□□□ -0.39
CNN3-203ENST00000415017 RTCAO00442 366 aaKnown RBP12.59□□□□□ -0.39
CNN3-203ENST00000415017 POLR1CO15160 346 aaPredicted RBP12.59□□□□□ -0.39
CNN3-203ENST00000415017 TMPRSS11DO60235 418 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 SH3BGRLO75368 114 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 SERPIND1P05546 499 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 PRPS2P11908 318 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 SDC1P18827 310 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 TACR1P25103 407 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 ATP4BP51164 291 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 PLA2G16P53816 162 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 DIO3P55073 304 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 MTTPP55157 894 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 RAB8AP61006 207 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 RPL38P63173 70 aaKnown RBP12.59□□□□□ -0.39
CNN3-203ENST00000415017 GSTA3Q16772 222 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 NDUFA9Q16795 377 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 SPDYAQ5MJ70 313 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 PRAMEF17Q5VTA0 474 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 TMEM198Q66K66 360 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 PAGE2Q7Z2X7 111 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 RIMKLAQ8IXN7 391 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 GPR135Q8IZ08 494 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 TTC29Q8NA56 475 aaPredicted RBP12.59□□□□□ -0.39
CNN3-203ENST00000415017 BCAS4Q8TDM0 211 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 PMEPA1Q969W9 287 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 TM4SF18Q96CE8 201 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 ZNF764Q96H86 408 aaPredicted RBP12.59□□□□□ -0.39
CNN3-203ENST00000415017 GBP5Q96PP8 586 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 TAAR9Q96RI9 348 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 CENPKQ9BS16 269 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 SORBS1Q9BX66 1292 aaKnown RBP12.59□□□□□ -0.39
CNN3-203ENST00000415017 FAM107BQ9H098 131 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 PRDM9Q9NQV7 894 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 SDR39U1Q9NRG7 319 aaPredicted RBP12.59□□□□□ -0.39
CNN3-203ENST00000415017 NOP53Q9NZM5 478 aaKnown RBP12.59□□□□□ -0.39
CNN3-203ENST00000415017 AKAP7Q9P0M2 348 aaPredicted RBP12.59□□□□□ -0.39
CNN3-203ENST00000415017 SRPK3Q9UPE1 567 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 EXO1Q9UQ84 846 aaKnown RBP12.59□□□□□ -0.39
CNN3-203ENST00000415017 ARL2BPQ9Y2Y0 163 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 TMEM184BQ9Y519 407 aaPredicted RBP12.59□□□□□ -0.39
CNN3-203ENST00000415017 AKAP13Q12802 2813 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 SCN2AQ99250 2005 aa12.59□□□□□ -0.39
CNN3-203ENST00000415017 IGLV3-12A0A075B6K2 115 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 A0A1B0GX78 115 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 DCDC2BA2VCK2 349 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 UBDO15205 165 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 TBX19O60806 448 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 DNAJB6O75190 326 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 B3GALT4O96024 378 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 HBQ1P09105 142 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 ITIH1P19827 911 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 ZFP36L2P47974 494 aaKnown RBP12.58□□□□□ -0.4
CNN3-203ENST00000415017 RAP1GDS1P52306 607 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 CBX1P83916 185 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 FOXM1Q08050 763 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 RUNX2Q13950 521 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 GALNTL6Q49A17 601 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 DEFB134Q4QY38 66 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 GKAP1Q5VSY0 366 aaPredicted RBP12.58□□□□□ -0.4
CNN3-203ENST00000415017 IL23RQ5VWK5 629 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 PRMT9Q6P2P2 845 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 CEACAM20Q6UY09 585 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 ALYREFQ86V81 257 aaKnown RBP12.58□□□□□ -0.4
CNN3-203ENST00000415017 DTWD1Q8N5C7 304 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 FNDC5Q8NAU1 212 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 N4BP2L2Q92802 583 aaPredicted RBP12.58□□□□□ -0.4
CNN3-203ENST00000415017 FAM122AQ96E09 287 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 NDC1Q9BTX1 674 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 ASPSCR1Q9BZE9 553 aa12.58□□□□□ -0.4
CNN3-203ENST00000415017 RABEP2Q9H5N1 569 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms