RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 HNRNPH1P31943 449 aaKnown RBP13.88□□□□□ -0.19
CHD1-202ENST00000414220 TSFMP43897 325 aaKnown RBP13.88□□□□□ -0.19
CHD1-202ENST00000414220 ARFIP1P53367 373 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 HERVK_113P63132 956 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 OLR1P78380 273 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 IFT88Q13099 833 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 NSDHLQ15738 373 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 CPSF6Q16630 551 aaKnown RBP eCLIP13.88□□□□□ -0.19
CHD1-202ENST00000414220 ADPRMQ3LIE5 342 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 VWA5B1Q5TIE3 1220 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 AGAP7PQ5VUJ5 663 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 PRAMEF9Q5VWM5 478 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 ABHD17CQ6PCB6 329 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 TMEM205Q6UW68 189 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 CROCCP2Q86T23 111 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 PARP9Q8IXQ6 854 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 L3MBTL4Q8NA19 623 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 OR5T3Q8NGG3 340 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 EPS8L3Q8TE67 593 aaKnown RBP13.88□□□□□ -0.19
CHD1-202ENST00000414220 RGMAQ96B86 450 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 AGAP4Q96P64 663 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 ERVK-6Q9BXR3 956 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 MS4A8Q9BY19 250 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 VN1R1Q9GZP7 353 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 LHPPQ9H008 270 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 SEMA4BQ9NPR2 832 aaPredicted RBP13.88□□□□□ -0.19
CHD1-202ENST00000414220 PSD3Q9NYI0 1048 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 AHSPQ9NZD4 102 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 PCTPQ9UKL6 214 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 MGAQ8IWI9 3026 aa13.88□□□□□ -0.19
CHD1-202ENST00000414220 CHD6Q8TD26 2715 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 LOC102723996A0A087X1L8 192 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 IGHV1-45A0A0A0MS14 117 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 A0A1W2PPM1 405 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 BLACEA4D250 179 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 LRRC14BA6NHZ5 514 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 A8MT66 165 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 MAGEB17A8MXT2 336 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 MLYCDO95822 493 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 TGFB1P01137 390 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 RPS17P08708 135 aaKnown RBP13.87□□□□□ -0.19
CHD1-202ENST00000414220 MYL2P10916 166 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 KRT4P19013 534 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 IMPDH1P20839 514 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 CRHR1P34998 444 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 DEKP35659 375 aaKnown RBP13.87□□□□□ -0.19
CHD1-202ENST00000414220 EEF1A2Q05639 463 aaKnown RBP13.87□□□□□ -0.19
CHD1-202ENST00000414220 ZRSR2Q15696 482 aaKnown RBP13.87□□□□□ -0.19
CHD1-202ENST00000414220 DEPDC1Q5TB30 811 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 KHDRBS2Q5VWX1 349 aaKnown RBP13.87□□□□□ -0.19
CHD1-202ENST00000414220 ATG14Q6ZNE5 492 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 RIPOR1Q6ZS17 1223 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 CPEB2Q7Z5Q1 589 aaKnown RBP13.87□□□□□ -0.19
CHD1-202ENST00000414220 PTRH1Q86Y79 214 aaKnown RBP13.87□□□□□ -0.19
CHD1-202ENST00000414220 CA13Q8N1Q1 262 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 MREGQ8N565 214 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 MYRIPQ8NFW9 859 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 HUS1BQ8NHY5 278 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 RDH11Q8TC12 318 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 MZB1Q8WU39 189 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 C8orf44Q96CB5 159 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 THOC3Q96J01 351 aaKnown RBP13.87□□□□□ -0.19
CHD1-202ENST00000414220 PTCHD1Q96NR3 888 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 F2RL3Q96RI0 385 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 SERPINI1Q99574 410 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 LPAR4Q99677 370 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 SMAD5Q99717 465 aaKnown RBP13.87□□□□□ -0.19
CHD1-202ENST00000414220 C1QTNF3Q9BXJ4 246 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 ZNF700Q9H0M5 742 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 ELOVL6Q9H5J4 265 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 EPS8L2Q9H6S3 715 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 ZNF160Q9HCG1 818 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 MLXIPLQ9NP71 852 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 NMRK1Q9NWW6 199 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 RAB21Q9UL25 225 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 SNX6Q9UNH7 406 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 RNF11Q9Y3C5 154 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 MMACHCQ9Y4U1 282 aa13.87□□□□□ -0.19
CHD1-202ENST00000414220 A0A0G2JN53 185 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 A0A1W2PQ72 361 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 H3BQF6 201 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 FOXE1O00358 373 aaPredicted RBP13.86□□□□□ -0.19
CHD1-202ENST00000414220 JRKO75564 520 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 CDC123O75794 336 aaPredicted RBP13.86□□□□□ -0.19
CHD1-202ENST00000414220 SERPINA7P05543 415 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 COX6A1P12074 109 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 SSR2P43308 183 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 RAB38P57729 211 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 CLCQ05315 142 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 ASPHQ12797 758 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 ABRAXAS2Q15018 415 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 EXT1Q16394 746 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 GGTA1PQ4G0N0 100 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 ZNF678Q5SXM1 525 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 JMJD6Q6NYC1 403 aaPredicted RBP13.86□□□□□ -0.19
CHD1-202ENST00000414220 QSOX2Q6ZRP7 698 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 VN1R5Q7Z5H4 357 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 HOMEZQ8IX15 550 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 TMEM151AQ8N4L1 468 aa13.86□□□□□ -0.19
CHD1-202ENST00000414220 ZADH2Q8N4Q0 377 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms