RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TMEM68Q96MH6 324 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 KLHL5Q96PQ7 755 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 RBBP8Q99708 897 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 TKTL2Q9H0I9 626 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 SIK2Q9H0K1 926 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 SMG9Q9H0W8 520 aaKnown RBP9.03□□□□□ -0.96
SNHG3-201ENST00000413987 ZNF334Q9HCZ1 680 aaPredicted RBP9.03□□□□□ -0.96
SNHG3-201ENST00000413987 TMEM181Q9P2C4 612 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 GULP1Q9UBP9 304 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 ANAPC2Q9UJX6 822 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 PCDHB1Q9Y5F3 818 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 RAD54BQ9Y620 910 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 A0A096LPK6 155 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 SAC3D1A6NKF1 404 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 KCNU1A8MYU2 1149 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 SLC16A6O15403 523 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 CCL16O15467 120 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 JRKO75564 520 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 MATN4O95460 622 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 LPLP06858 475 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 ACAA1P09110 424 aaPredicted RBP9.03□□□□□ -0.96
SNHG3-201ENST00000413987 CD1EP15812 388 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 EPCAMP16422 314 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 MATN1P21941 496 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 RPL10P27635 214 aaKnown RBP9.03□□□□□ -0.96
SNHG3-201ENST00000413987 OPRL1P41146 370 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 FASLGP48023 281 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 ARL13AQ5H913 290 aaPredicted RBP9.03□□□□□ -0.96
SNHG3-201ENST00000413987 PSAPL1Q6NUJ1 521 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 STRADAQ7RTN6 431 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 PTAR1Q7Z6K3 402 aaPredicted RBP9.03□□□□□ -0.96
SNHG3-201ENST00000413987 TFAP2DQ7Z6R9 452 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 PARP8Q8N3A8 854 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 CANT1Q8WVQ1 401 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 CFHR4Q92496 578 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 SLC22A12Q96S37 553 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 CYP2S1Q96SQ9 504 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 MGME1Q9BQP7 344 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 SLC25A23Q9BV35 468 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 ABCC13Q9NSE7 274 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 CACNA2D2Q9NY47 1150 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 FZD10Q9ULW2 581 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 PRORSD1PA6NEY8 169 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 TNFRSF10AO00220 468 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 WRBO00258 174 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 DNPH1O43598 174 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 OR2C1O95371 312 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 C8AP07357 584 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 CHRNGP07510 517 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 ERCC2P18074 760 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 RRM2P31350 389 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 NAGLUP54802 743 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 AIMP2Q13155 320 aaKnown RBP9.02□□□□□ -0.97
SNHG3-201ENST00000413987 SELENBP1Q13228 472 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 PCSK7Q16549 785 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 SPATS1Q496A3 300 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 TIGD2Q4W5G0 525 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 ZBTB37Q5TC79 503 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 REP15Q6BDI9 236 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 ESRP1Q6NXG1 681 aaKnown RBP9.02□□□□□ -0.97
SNHG3-201ENST00000413987 PRMT9Q6P2P2 845 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 SPATA19Q7Z5L4 167 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 TMEM150AQ86TG1 271 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 CXorf67Q86X51 503 aaPredicted RBP9.02□□□□□ -0.97
SNHG3-201ENST00000413987 PQLC3Q8N755 202 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 ASZ1Q8WWH4 475 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 DPF1Q92782 380 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 CERS2Q96G23 380 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 DGAT2Q96PD7 388 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 ZNF670Q9BS34 389 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 FBXO44Q9H4M3 255 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 WDCPQ9H6R7 721 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 CPNE5Q9HCH3 593 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 AGPAT4Q9NRZ5 378 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.02□□□□□ -0.97
SNHG3-201ENST00000413987 SMPD4Q9NXE4 827 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 P4HTMQ9NXG6 502 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 LEF1Q9UJU2 399 aaPredicted RBP9.02□□□□□ -0.97
SNHG3-201ENST00000413987 SLC22A14Q9Y267 594 aa9.02□□□□□ -0.97
SNHG3-201ENST00000413987 RBMX2Q9Y388 322 aaKnown RBP9.02□□□□□ -0.97
SNHG3-201ENST00000413987 DHRS12A0PJE2 317 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 FAM92AA1XBS5 289 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 LRRTM2O43300 516 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 NUAK1O60285 661 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 KLKB1P03952 638 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 SERPINB1P30740 379 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 KCNQ1P51787 676 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 CDC20Q12834 499 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 ABRQ12979 859 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 BNIP2Q12982 314 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 SF3B4Q15427 424 aaKnown RBP eCLIP9.01□□□□□ -0.971e-33■■■■■ 31.6
SNHG3-201ENST00000413987 AASDHQ4L235 1098 aaPredicted RBP9.01□□□□□ -0.97
SNHG3-201ENST00000413987 PLA1AQ53H76 456 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 PITRM1Q5JRX3 1037 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 C6orf10Q5SRN2 563 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 SLX4IPQ5VYV7 408 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 TMEM198Q66K66 360 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 TXNDC8Q6A555 127 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 TTC23LQ6PF05 361 aa9.01□□□□□ -0.97
SNHG3-201ENST00000413987 LRFN4Q6PJG9 635 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms