RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 RPS17P08708 135 aaKnown RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 PTGS2P35354 604 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 NR1H2P55055 460 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 TAS2R50P59544 299 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 DLG1Q12959 904 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 CCNIQ14094 377 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 CYP2R1Q6VVX0 501 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 PNPLA1Q8N8W4 532 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 OR52E1Q8NGJ3 308 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 NSUN5Q96P11 429 aaKnown RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 GFM1Q96RP9 751 aaKnown RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 PNPLA3Q9NST1 481 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 RARRES3Q9UL19 164 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 A0A0G2JN53 185 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 A0A0J9YY10 115 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 SLCO2B1O94956 709 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 NUDT14O95848 222 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 AGR2O95994 175 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 FGF4P08620 206 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 ATP6V1B1P15313 513 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 ETV4P43268 484 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 GSTM5P46439 218 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 RPL5P46777 297 aaKnown RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 RGS6P49758 472 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 CLK1P49759 484 aaKnown RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 EIF2B2P49770 351 aaKnown RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 MTTPP55157 894 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 VSX2P58304 361 aaPredicted RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 VBP1P61758 197 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 ZNF155Q12901 538 aaPredicted RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 PDK3Q15120 406 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 SMU1Q2TAY7 513 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 HKDC1Q2TB90 917 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 C6orf136Q5SQH8 315 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 GCNT6Q5T4J0 391 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 Q6ZS52 159 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 ZFAND4Q86XD8 727 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 CSNK1A1LQ8N752 337 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 GTPBP3Q969Y2 492 aaKnown RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 ISL2Q96A47 359 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 METTL2AQ96IZ6 378 aaKnown RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 OR52B2Q96RD2 323 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 ZFYVE21Q9BQ24 234 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 ZDHHC5Q9C0B5 715 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 P2RY12Q9H244 342 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 NEUROD4Q9HD90 331 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 ACTR10Q9NZ32 417 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 ABI3Q9P2A4 366 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 FTSJ1Q9UET6 329 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 SLC6A14Q9UN76 642 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 TRBV5-4A0A0C4DH59 114 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 SAGE2PA6NJ88 616 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 AQP12BA6NM10 295 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 METTL12A8MUP2 240 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 FADS2P1A8MWK0 482 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 EFEMP2O95967 443 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 NR2F6P10588 404 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 PGGT1BP53609 377 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 MAPK10P53779 464 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 ARSFP54793 590 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 ZXDBP98169 803 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 ADGRE1Q14246 886 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 TRIM61Q5EBN2 209 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 KIAA1211LQ6NV74 962 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 GPR153Q6NV75 609 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 USP53Q70EK8 1073 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 SLC30A8Q8IWU4 369 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 AQP12AQ8IXF9 295 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 PELOQ9BRX2 385 aaKnown RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 LGR4Q9BXB1 951 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 CHRDQ9H2X0 955 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 TMEM165Q9HC07 324 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 WSB2Q9NYS7 404 aaPredicted RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 SAMD4AQ9UPU9 718 aaKnown RBP8.19□□□□□ -1.1
SYNE1-211ENST00000413186 POMPQ9Y244 141 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 SCN5AQ14524 2016 aa8.19□□□□□ -1.1
SYNE1-211ENST00000413186 XIRP2A4UGR9 3374 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 OR2B3O76000 313 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 GTF2E2P29084 291 aaKnown RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 PDHA2P29803 388 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 TIA1P31483 386 aaKnown RBP eCLIP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 RAB7AP51149 207 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 BIKQ13323 160 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 REP15Q6BDI9 236 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 RAB11FIP2Q7L804 512 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 XAGE5Q8WWM1 108 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 BIRC7Q96CA5 298 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 MSLNLQ96KJ4 702 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 BIRC8Q96P09 236 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 KCNA7Q96RP8 456 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 ZNF395Q9H8N7 513 aaPredicted RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 MBNL1Q9NR56 388 aaKnown RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 CLCA3PQ9Y6N3 262 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 SNNO75324 88 aaPredicted RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 ARNTP27540 789 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 GCAP28676 217 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 ACADVLP49748 655 aa8.18□□□□□ -1.1
SYNE1-211ENST00000413186 MEF2AQ02078 507 aaPredicted RBP8.18□□□□□ -1.1
SYNE1-211ENST00000413186 HSPB3Q12988 150 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms