RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 PHLDA2Q53GA4 152 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 CT45A2Q5DJT8 189 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 RABGAP1LQ5R372 815 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 PRAMEF20Q5VT98 475 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 HIST2H2AA3Q6FI13 130 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 NIPAL3Q6P499 406 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 CTR9Q6PD62 1173 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 CBLN3Q6UW01 205 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 RD3Q7Z3Z2 195 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 ARL14Q8N4G2 192 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 FAM184AQ8NB25 1140 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 COLGALT1Q8NBJ5 622 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 RNF149Q8NC42 400 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 BBOF1Q8ND07 529 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 OR52J3Q8NH60 311 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 MIPOL1Q8TD10 442 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 GIPC3Q8TF64 312 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 TMEM255BQ8WV15 326 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 MCHR2Q969V1 340 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 VPS35Q96QK1 796 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 USP28Q96RU2 1077 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 RAB40CQ96S21 281 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 C1QTNF7Q9BXJ2 289 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 TLE6Q9H808 572 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 RNF121Q9H920 327 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 FANCEQ9HB96 536 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 TBC1D13Q9NVG8 400 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 PTTG2Q9NZH5 202 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 BCAP29Q9UHQ4 241 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 AMDHD2Q9Y303 409 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 ATG4BQ9Y4P1 393 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.52□□□□□ -1.69
LSM5-205ENST00000409952 ZMYM2Q9UBW7 1377 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 CLSPNQ9HAW4 1339 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 A0A1W2PRB8 838 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 CCDC162PA2VCL2 907 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 GSAPA4D1B5 854 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 NCF1BA6NI72 391 aaPredicted RBP4.51□□□□□ -1.69
LSM5-205ENST00000409952 NCF1CA8MVU1 366 aaPredicted RBP4.51□□□□□ -1.69
LSM5-205ENST00000409952 ZNF814B7Z6K7 855 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 E9PI62 339 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 EXTL3O43909 919 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 NEMFO60524 1076 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 RFPL2O75678 378 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 EPOP01588 193 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 GSTA2P09210 222 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 F3P13726 295 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 ANXA8P13928 327 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 CD59P13987 128 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 ARSBP15848 533 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 POLR2CP19387 275 aaPredicted RBP4.51□□□□□ -1.69
LSM5-205ENST00000409952 NCF2P19878 526 aaPredicted RBP4.51□□□□□ -1.69
LSM5-205ENST00000409952 AXLP30530 894 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 DUTP33316 252 aaKnown RBP4.51□□□□□ -1.69
LSM5-205ENST00000409952 THOP1P52888 689 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 SUCLG1P53597 346 aaKnown RBP4.51□□□□□ -1.69
LSM5-205ENST00000409952 NAPAP54920 295 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 RPS18P62269 152 aaKnown RBP4.51□□□□□ -1.69
LSM5-205ENST00000409952 CNTN2Q02246 1040 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 ID2Q02363 134 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 GPR18Q14330 331 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 TATDN3Q17R31 274 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 TMEM35AQ53FP2 167 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 ZNF542PQ5EBM4 170 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 ZNF311Q5JNZ3 666 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 PHYHD1Q5SRE7 291 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 NDUFAF5Q5TEU4 345 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 ANXA8L1Q5VT79 327 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 FAM69BQ5VUD6 431 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 LIPKQ5VXJ0 399 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 ASPHD2Q6ICH7 369 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 SYCE2Q6PIF2 218 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 CCNI2Q6ZMN8 369 aaPredicted RBP4.51□□□□□ -1.69
LSM5-205ENST00000409952 CPEB2Q7Z5Q1 589 aaKnown RBP4.51□□□□□ -1.69
LSM5-205ENST00000409952 GLCCI1Q86VQ1 547 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 NBPF5PQ86XG9 351 aaPredicted RBP4.51□□□□□ -1.69
LSM5-205ENST00000409952 TMEM139Q8IV31 216 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 CCDC60Q8IWA6 550 aaPredicted RBP4.51□□□□□ -1.69
LSM5-205ENST00000409952 PHC2Q8IXK0 858 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 GPALPP1Q8IXQ4 340 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 SLC43A2Q8N370 569 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 NIPA2Q8N8Q9 360 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 OSTF1Q92882 214 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 RASD2Q96D21 266 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 MRPL53Q96EL3 112 aaKnown RBP4.51□□□□□ -1.69
LSM5-205ENST00000409952 RBM41Q96IZ5 413 aaKnown RBP4.51□□□□□ -1.69
LSM5-205ENST00000409952 LRR1Q96L50 414 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 SIGLEC11Q96RL6 698 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 WRAP53Q9BUR4 548 aaKnown RBP4.51□□□□□ -1.69
LSM5-205ENST00000409952 NUSAP1Q9BXS6 441 aaKnown RBP4.51□□□□□ -1.69
LSM5-205ENST00000409952 KLK15Q9H2R5 256 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 FN3KRPQ9HA64 309 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 CALHM2Q9HA72 323 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 KRCC1Q9NPI7 259 aaPredicted RBP4.51□□□□□ -1.69
LSM5-205ENST00000409952 ETNK2Q9NVF9 386 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 RNF14Q9UBS8 474 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 SLC12A6Q9UHW9 1150 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 CFAP45Q9UL16 551 aa4.51□□□□□ -1.69
LSM5-205ENST00000409952 ZNF490Q9ULM2 529 aaPredicted RBP4.51□□□□□ -1.69
LSM5-205ENST00000409952 B9D1Q9UPM9 204 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms