RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 SLC22A3O75751 556 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 POP7O75817 140 aaKnown RBP13.73□□□□□ -0.21
MINDY4-202ENST00000409881 DNAJB5O75953 348 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 CST1P01037 141 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 GPR89BP0CG08 455 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 IL12AP29459 219 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 FMO3P31513 532 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 CASP3P42574 277 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 POLR2JP52435 117 aaKnown RBP13.73□□□□□ -0.21
MINDY4-202ENST00000409881 TCEA2Q15560 299 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 NKG7Q16617 165 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 SYTL3Q4VX76 610 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 COLEC12Q5KU26 742 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 STEAP3Q658P3 488 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 SLC22A15Q8IZD6 547 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 FAM83FQ8NEG4 500 aaPredicted RBP13.73□□□□□ -0.21
MINDY4-202ENST00000409881 FAM174AQ8TBP5 190 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 NUDT8Q8WV74 236 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 YIPF6Q96EC8 236 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 ZNF300Q96RE9 604 aaPredicted RBP13.73□□□□□ -0.21
MINDY4-202ENST00000409881 SEMA4BQ9NPR2 832 aaPredicted RBP13.73□□□□□ -0.21
MINDY4-202ENST00000409881 MAGEL2Q9UJ55 1249 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 DHRS7Q9Y394 339 aa13.73□□□□□ -0.21
MINDY4-202ENST00000409881 GNGT2O14610 69 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 ANXA6P08133 673 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 ACP5P13686 325 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 ZNF37AP17032 561 aaPredicted RBP13.72□□□□□ -0.21
MINDY4-202ENST00000409881 CSNK1EP49674 416 aaKnown RBP13.72□□□□□ -0.21
MINDY4-202ENST00000409881 SRP54P61011 504 aaKnown RBP13.72□□□□□ -0.21
MINDY4-202ENST00000409881 PHC1P78364 1004 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 PPP2R2BQ00005 443 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 IL5RAQ01344 420 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 VAC14Q08AM6 782 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 HSPA14Q0VDF9 509 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 LPAL2Q16609 132 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 ZNF542PQ5EBM4 170 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 DESI1Q6ICB0 168 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 HID1Q8IV36 788 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 FIG4Q92562 907 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 POPDC3Q9HBV1 291 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 AIG1Q9NVV5 245 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 SPTY2D1-AS1A0A0U1RR47 76 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 TLR4O00206 839 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 KMOO15229 486 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 SNX2O60749 519 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 ENO2P09104 434 aaPredicted RBP13.72□□□□□ -0.21
MINDY4-202ENST00000409881 CD9P21926 228 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 AOAHP28039 575 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 AFF3P51826 1226 aaKnown RBP13.72□□□□□ -0.21
MINDY4-202ENST00000409881 CDK5R2Q13319 367 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 FZD2Q14332 565 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 OR4D1Q15615 310 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 ALG11Q2TAA5 492 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 TTLL9Q3SXZ7 439 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 ZNF691Q5VV52 312 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 RSBN1Q5VWQ0 802 aaPredicted RBP13.72□□□□□ -0.21
MINDY4-202ENST00000409881 LILRA3Q8N6C8 439 aaPredicted RBP13.72□□□□□ -0.21
MINDY4-202ENST00000409881 MCFD2Q8NI22 146 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 PIGKQ92643 395 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 SYTL2Q9HCH5 934 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 GPR27Q9NS67 375 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 PCDHGA10Q9Y5H3 936 aa13.72□□□□□ -0.21
MINDY4-202ENST00000409881 RASGRP1O95267 797 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 ANGPTL1O95841 491 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 NTRK1P04629 796 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 GTF2E2P29084 291 aaKnown RBP13.71□□□□□ -0.21
MINDY4-202ENST00000409881 NFKB2Q00653 900 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 NPTX1Q15818 432 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 FXNQ16595 210 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 FAM209AQ5JX71 171 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 RAB44Q7Z6P3 723 aaPredicted RBP13.71□□□□□ -0.21
MINDY4-202ENST00000409881 C11orf96Q7Z7L8 435 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 TMEM179BQ7Z7N9 219 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 IQCHQ86VS3 1027 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 AMZ2Q86W34 360 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 PLD3Q8IV08 490 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 LACC1Q8IV20 430 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 CFAP206Q8IYR0 622 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 ATL1Q8WXF7 558 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 TP53INP1Q96A56 240 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 LINGO1Q96FE5 620 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 ZC3H10Q96K80 434 aaKnown RBP13.71□□□□□ -0.21
MINDY4-202ENST00000409881 RDH12Q96NR8 316 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 OR2M4Q96R27 311 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 RHNO1Q9BSD3 238 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 TMEM74BQ9NUR3 256 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 SLC23A2Q9UGH3 650 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 PLEKHM1Q9Y4G2 1056 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 R4GN57 208 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 SPAG17Q6Q759 2223 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 TNFRSF10CO14798 259 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 IDH3BO43837 385 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 FADS2O95864 444 aaKnown RBP13.71□□□□□ -0.21
MINDY4-202ENST00000409881 GNSP15586 552 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 CD1DP15813 335 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 CXCR2P25025 360 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 PRDX3P30048 256 aaKnown RBP13.71□□□□□ -0.21
MINDY4-202ENST00000409881 GRK3P35626 688 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 PREPP48147 710 aa13.71□□□□□ -0.21
MINDY4-202ENST00000409881 TRPC1P48995 793 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms