RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 ZNF382Q96SR6 550 aa18.75■□□□□ 0.59
PDLIM2-207ENST00000409417 ING2Q9H160 280 aa18.75■□□□□ 0.59
PDLIM2-207ENST00000409417 DMRT3Q9NQL9 472 aa18.75■□□□□ 0.59
PDLIM2-207ENST00000409417 PSD3Q9NYI0 1048 aa18.75■□□□□ 0.59
PDLIM2-207ENST00000409417 MKL2Q9ULH7 1088 aa18.75■□□□□ 0.59
PDLIM2-207ENST00000409417 KALRNO60229 2985 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 ARGFXA6NJG6 315 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 AGPSO00116 658 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 FOXE1O00358 373 aaPredicted RBP18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 SOCS6O14544 535 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 PCDH17O14917 1159 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 HEXBP07686 556 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 CYC1P08574 325 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 FAM87AP0C7U9 286 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 TSPAN8P19075 237 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 PTX3P26022 381 aaPredicted RBP18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 OLR1P78380 273 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 LCP2Q13094 533 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 DEPDC1Q5TB30 811 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 LETMD1Q6P1Q0 360 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 UBE3DQ7Z6J8 389 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 CCNYL1Q8N7R7 359 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 ARMC2Q8NEN0 867 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 TBC1D20Q96BZ9 403 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 PEX11GQ96HA9 241 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 VPS50Q96JG6 964 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 CENPKQ9BS16 269 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 TBCDQ9BTW9 1192 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 NPLQ9BXD5 320 aaPredicted RBP18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 ROGDIQ9GZN7 287 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 VN1R1Q9GZP7 353 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 ADNPQ9H2P0 1102 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 ZNF225Q9UK10 706 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 PPT2Q9UMR5 302 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 STK38LQ9Y2H1 464 aa18.74■□□□□ 0.59
PDLIM2-207ENST00000409417 A0A0G2JN53 185 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 MAGEB17A8MXT2 336 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 B3GALT2O43825 422 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 SPAG7O75391 227 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 FHP07954 510 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 RNH1P13489 461 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 NEK2P51955 445 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 NAGLUP54802 743 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 MTTPP55157 894 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 MINDY4Q4G0A6 757 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 DCAF10Q5QP82 559 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 CPZQ66K79 652 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 RNF175Q8N4F7 328 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 EXD3Q8N9H8 876 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 MYRIPQ8NFW9 859 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 PGM2Q96G03 612 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 FER1L6-AS2Q96M78 137 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 SERINC2Q96SA4 455 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 OR51B5Q9H339 312 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 PRDM7Q9NQW5 492 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 TRPS1Q9UHF7 1281 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 TUBD1Q9UJT1 453 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 RALYQ9UKM9 306 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 BOD1L1Q8NFC6 3051 aa18.73■□□□□ 0.59
PDLIM2-207ENST00000409417 MED13Q9UHV7 2174 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 SH3BGRLO75368 114 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 CREB1P16220 341 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 JAK1P23458 1154 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 ARFIP1P53367 373 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 RPS13P62277 151 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 IFT88Q13099 833 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 TNFAIP8L3Q5GJ75 292 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 TTC19Q6DKK2 380 aaPredicted RBP18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 GPRIN3Q6ZVF9 776 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 OR11G2Q8NGC1 345 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 TCP10LQ8TDR4 215 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 BBC3Q96PG8 261 aaPredicted RBP18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 FAM111AQ96PZ2 611 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 TRIM55Q9BYV6 548 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 CENPHQ9H3R5 247 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 GSTO2Q9H4Y5 243 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 ELOVL6Q9H5J4 265 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 COPS7BQ9H9Q2 264 aaPredicted RBP18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 LANCL2Q9NS86 450 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 SLC17A7Q9P2U7 560 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 FBXL4Q9UKA2 621 aa18.72■□□□□ 0.59
PDLIM2-207ENST00000409417 A0A1W2PQ72 361 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 PSMD12O00232 456 aaPredicted RBP18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 TYROBPO43914 113 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 ALOX12BO75342 701 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 SFTPCP11686 197 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 ACPPP15309 386 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 EFNA3P52797 238 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 PKNOX1P55347 436 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 CUL3Q13618 768 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 AP5B1Q2VPB7 878 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 TUBB8Q3ZCM7 444 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 CFAP157Q5JU67 520 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 MFSD4BQ5TF39 518 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 LIPMQ5VYY2 423 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 TMEM205Q6UW68 189 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 C10orf107Q8IVU9 208 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 CA13Q8N1Q1 262 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 CLEC1AQ8NC01 280 aa18.71■□□□□ 0.59
PDLIM2-207ENST00000409417 METTL21AQ8WXB1 218 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms