RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 IGKV3D-11A0A0A0MRZ8 115 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 PSMD12O00232 456 aaPredicted RBP18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 STK16O75716 305 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 RASAL1O95294 804 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 SLC35E2BP0CK96 405 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 CD22P20273 847 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 STXBP1P61764 594 aaKnown RBP18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 PMP22Q01453 160 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 GUCY2DQ02846 1103 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 RUNX2Q13950 521 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 SLMAPQ14BN4 828 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 MEP1AQ16819 746 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 CDKL4Q5MAI5 379 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 KRT78Q8N1N4 520 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 PDPRQ8NCN5 879 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 TTLQ8NG68 377 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 ELP5Q8TE02 316 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 GAL3ST3Q96A11 431 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 CAPS2Q9BXY5 557 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 ALG9Q9H6U8 611 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 ZNF490Q9ULM2 529 aaPredicted RBP18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 RNF112Q9ULX5 631 aa18.09■□□□□ 0.49
SMARCB1-204ENST00000407422 TCRBV16S1A1N1A0A5B0 115 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 ERI3O43414 337 aaKnown RBP18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 WISP2O76076 250 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 EPORP19235 508 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 MST1P26927 711 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 COL8A1P27658 744 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 STX2P32856 288 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 CD96P40200 585 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 DOC2AQ14183 400 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 XKR6Q5GH73 641 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 ZNF766Q5HY98 468 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 RAPH1Q70E73 1250 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 ISCA2Q86U28 154 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 FAR2Q96K12 515 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 LRRC1Q9BTT6 524 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 HES7Q9BYE0 225 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 EHD1Q9H4M9 534 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 NT5DC2Q9H857 520 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 PRDM9Q9NQV7 894 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 CACNA1DQ01668 2161 aa18.08■□□□□ 0.48
SMARCB1-204ENST00000407422 A8MUA0 341 aa18.07■□□□□ 0.48
SMARCB1-204ENST00000407422 CLGNO14967 610 aa18.07■□□□□ 0.48
SMARCB1-204ENST00000407422 CLEC3AO75596 197 aa18.07■□□□□ 0.48
SMARCB1-204ENST00000407422 TFEBP19484 476 aa18.07■□□□□ 0.48
SMARCB1-204ENST00000407422 PLA2G16P53816 162 aa18.07■□□□□ 0.48
SMARCB1-204ENST00000407422 PDK4Q16654 411 aa18.07■□□□□ 0.48
SMARCB1-204ENST00000407422 SPINK14Q6IE38 97 aa18.07■□□□□ 0.48
SMARCB1-204ENST00000407422 MAMDC2Q7Z304 686 aaPredicted RBP18.07■□□□□ 0.48
SMARCB1-204ENST00000407422 SLC5A8Q8N695 610 aa18.07■□□□□ 0.48
SMARCB1-204ENST00000407422 MDS2Q8NDY4 140 aa18.07■□□□□ 0.48
SMARCB1-204ENST00000407422 UTP23Q9BRU9 249 aaKnown RBP18.07■□□□□ 0.48
SMARCB1-204ENST00000407422 CDCP1Q9H5V8 836 aa18.07■□□□□ 0.48
SMARCB1-204ENST00000407422 KLHL1Q9NR64 748 aa18.07■□□□□ 0.48
SMARCB1-204ENST00000407422 IGSF5Q9NSI5 407 aa18.07■□□□□ 0.48
SMARCB1-204ENST00000407422 ZDHHC18Q9NUE0 388 aa18.07■□□□□ 0.48
SMARCB1-204ENST00000407422 ANKDD1BA6NHY2 528 aa18.06■□□□□ 0.48
SMARCB1-204ENST00000407422 GABRR3A8MPY1 467 aa18.06■□□□□ 0.48
SMARCB1-204ENST00000407422 CCNT2O60583 730 aaKnown RBP18.06■□□□□ 0.48
SMARCB1-204ENST00000407422 HNRNPFP52597 415 aaKnown RBP18.06■□□□□ 0.48
SMARCB1-204ENST00000407422 OR1C1Q15619 314 aa18.06■□□□□ 0.48
SMARCB1-204ENST00000407422 ADPRMQ3LIE5 342 aa18.06■□□□□ 0.48
SMARCB1-204ENST00000407422 ZNF468Q5VIY5 522 aaPredicted RBP18.06■□□□□ 0.48
SMARCB1-204ENST00000407422 TMEM52Q8NDY8 209 aa18.06■□□□□ 0.48
SMARCB1-204ENST00000407422 NFAM1Q8NET5 270 aaPredicted RBP18.06■□□□□ 0.48
SMARCB1-204ENST00000407422 STAG3L4Q8TBR4 150 aa18.06■□□□□ 0.48
SMARCB1-204ENST00000407422 MRRFQ96E11 262 aaKnown RBP18.06■□□□□ 0.48
SMARCB1-204ENST00000407422 WDR34Q96EX3 536 aa18.06■□□□□ 0.48
SMARCB1-204ENST00000407422 QRFPRQ96P65 431 aa18.06■□□□□ 0.48
SMARCB1-204ENST00000407422 CD244Q9BZW8 370 aa18.06■□□□□ 0.48
SMARCB1-204ENST00000407422 PITHD1Q9GZP4 211 aaPredicted RBP18.06■□□□□ 0.48
SMARCB1-204ENST00000407422 REXO4Q9GZR2 422 aaKnown RBP18.06■□□□□ 0.48
SMARCB1-204ENST00000407422 ABI3Q9P2A4 366 aa18.06■□□□□ 0.48
SMARCB1-204ENST00000407422 SAGE2PA6NJ88 616 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 CRYABP02511 175 aaKnown RBP18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 S100BP04271 92 aaPredicted RBP18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 STSP08842 583 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 MYBL2P10244 700 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 GSTM2P28161 218 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 TAS2R50P59544 299 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 UBAP2Q5T6F2 1119 aaKnown RBP18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 C8orf74Q6P047 294 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 GFRALQ6UXV0 394 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 OR2L5Q8NG80 312 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 PTCD3Q96EY7 689 aaKnown RBP18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 SEC16BQ96JE7 1060 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 C16orf45Q96MC5 204 aaPredicted RBP18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 ATOH8Q96SQ7 321 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 HMX2A2RU54 273 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 TGFBR3LH3BV60 316 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 UBXN8O00124 270 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 UNC5CO95185 931 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 CRABP2P29373 138 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 IRF9Q00978 393 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 OC90Q02509 493 aaPredicted RBP18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 CKAP4Q07065 602 aaKnown RBP18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 CHIT1Q13231 466 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 NAB1Q13506 487 aa18.05■□□□□ 0.48
SMARCB1-204ENST00000407422 BMPR2Q13873 1038 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms