RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 COMMD6Q7Z4G1 85 aa31.56■■■□□ 2.64
CSNK1E-204ENST00000403904 GALNT6Q8NCL4 622 aa31.56■■■□□ 2.64
CSNK1E-204ENST00000403904 ZDHHC19Q8WVZ1 309 aaPredicted RBP31.56■■■□□ 2.64
CSNK1E-204ENST00000403904 MVB12AQ96EY5 273 aa31.56■■■□□ 2.64
CSNK1E-204ENST00000403904 SPRY4Q9C004 299 aa31.56■■■□□ 2.64
CSNK1E-204ENST00000403904 COPS7BQ9H9Q2 264 aaPredicted RBP31.56■■■□□ 2.64
CSNK1E-204ENST00000403904 LRTM1Q9HBL6 345 aa31.56■■■□□ 2.64
CSNK1E-204ENST00000403904 C1orf109Q9NX04 203 aa31.56■■■□□ 2.64
CSNK1E-204ENST00000403904 PCDHGA7Q9Y5G6 932 aa31.56■■■□□ 2.64
CSNK1E-204ENST00000403904 FREM2Q5SZK8 3169 aa31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 BRINP1O60477 761 aa31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 SEC22BO75396 215 aa31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 EEDO75530 441 aaKnown RBP31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 TGDSO95455 350 aa31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 GBAP04062 536 aa31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 ITGAXP20702 1163 aa31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 ATP5A1P25705 553 aaKnown RBP31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 CERS1P27544 350 aa31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 EPHA3P29320 983 aa31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 AVPR1BP47901 424 aa31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 ARFIP1P53367 373 aa31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 AQP5P55064 265 aa31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 ACSM2AQ08AH3 577 aa31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 SLC9B1Q4ZJI4 515 aa31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 ACSM2BQ68CK6 577 aa31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 CGB2Q6NT52 195 aa31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 PROKR1Q8TCW9 393 aa31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 AKTIPQ9H8T0 292 aa31.55■■■□□ 2.64
CSNK1E-204ENST00000403904 A0A088AWK7 358 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 GOLGA8QA0A0J9YX86 632 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 GOLGA8OA6NCC3 632 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 NPIPB8E9PQR5 432 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 GOLGA8NF8WBI6 632 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 MEN1O00255 615 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 DNAJB6O75190 326 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 RDH16O75452 317 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 DXOO77932 396 aaKnown RBP31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 KLK1P06870 262 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 ALOX15P16050 662 aaPredicted RBP31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 ZNF10P21506 573 aaPredicted RBP31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 HIST1H1TP22492 207 aaPredicted RBP31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 MTTPP55157 894 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 OLR1P78380 273 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 ABHD18Q0P651 414 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 ATP6AP1LQ52LC2 224 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 SPIN4Q56A73 249 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 PRMT9Q6P2P2 845 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 ACOT4Q8N9L9 421 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 RFWD2Q8NHY2 731 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 NXPE2Q96DL1 559 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 TRIM55Q9BYV6 548 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 AKIRIN1Q9H9L7 192 aaPredicted RBP31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 DCTN4Q9UJW0 460 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 CDC14AQ9UNH5 594 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 MSRB2Q9Y3D2 182 aa31.54■■■□□ 2.64
CSNK1E-204ENST00000403904 DIAPH2O60879 1101 aa31.53■■■□□ 2.64
CSNK1E-204ENST00000403904 DLGAP3O95886 979 aa31.53■■■□□ 2.64
CSNK1E-204ENST00000403904 TSFMP43897 325 aaKnown RBP31.53■■■□□ 2.64
CSNK1E-204ENST00000403904 SF3A3Q12874 501 aaKnown RBP eCLIP31.53■■■□□ 2.649e-8■■■■■ 35.8
CSNK1E-204ENST00000403904 KIAA0040Q15053 153 aa31.53■■■□□ 2.64
CSNK1E-204ENST00000403904 RFTN2Q52LD8 501 aaPredicted RBP31.53■■■□□ 2.64
CSNK1E-204ENST00000403904 ZNF385CQ66K41 422 aaPredicted RBP31.53■■■□□ 2.64
CSNK1E-204ENST00000403904 EPGNQ6UW88 154 aa31.53■■■□□ 2.64
CSNK1E-204ENST00000403904 NUDT13Q86X67 352 aa31.53■■■□□ 2.64
CSNK1E-204ENST00000403904 DSELQ8IZU8 1212 aa31.53■■■□□ 2.64
CSNK1E-204ENST00000403904 OR5T3Q8NGG3 340 aa31.53■■■□□ 2.64
CSNK1E-204ENST00000403904 PPP3R2Q96LZ3 170 aa31.53■■■□□ 2.64
CSNK1E-204ENST00000403904 LRFN5Q96NI6 719 aa31.53■■■□□ 2.64
CSNK1E-204ENST00000403904 ROGDIQ9GZN7 287 aa31.53■■■□□ 2.64
CSNK1E-204ENST00000403904 DDX31Q9H8H2 851 aaKnown RBP31.53■■■□□ 2.64
CSNK1E-204ENST00000403904 ZNF304Q9HCX3 659 aa31.53■■■□□ 2.64
CSNK1E-204ENST00000403904 GMNCA6NCL1 334 aa31.52■■■□□ 2.64
CSNK1E-204ENST00000403904 RPL38P63173 70 aaKnown RBP31.52■■■□□ 2.64
CSNK1E-204ENST00000403904 SKP1P63208 163 aa31.52■■■□□ 2.64
CSNK1E-204ENST00000403904 SLC9A5Q14940 896 aa31.52■■■□□ 2.64
CSNK1E-204ENST00000403904 C6orf136Q5SQH8 315 aa31.52■■■□□ 2.64
CSNK1E-204ENST00000403904 TIPARPQ7Z3E1 657 aaKnown RBP31.52■■■□□ 2.64
CSNK1E-204ENST00000403904 ZFAND4Q86XD8 727 aa31.52■■■□□ 2.64
CSNK1E-204ENST00000403904 SHISA5Q8N114 240 aa31.52■■■□□ 2.64
CSNK1E-204ENST00000403904 C11orf24Q96F05 449 aaPredicted RBP31.52■■■□□ 2.64
CSNK1E-204ENST00000403904 SERINC2Q96SA4 455 aa31.52■■■□□ 2.64
CSNK1E-204ENST00000403904 H0YIG0 161 aa31.51■■■□□ 2.64
CSNK1E-204ENST00000403904 TROVE2P10155 538 aaKnown RBP eCLIP31.51■■■□□ 2.64
CSNK1E-204ENST00000403904 RAE1P78406 368 aaKnown RBP31.51■■■□□ 2.64
CSNK1E-204ENST00000403904 DCDP81605 110 aaKnown RBP31.51■■■□□ 2.64
CSNK1E-204ENST00000403904 MAT1AQ00266 395 aaKnown RBP31.51■■■□□ 2.64
CSNK1E-204ENST00000403904 NIPAL1Q6NVV3 410 aa31.51■■■□□ 2.64
CSNK1E-204ENST00000403904 C6orf15Q6UXA7 325 aaPredicted RBP31.51■■■□□ 2.64
CSNK1E-204ENST00000403904 PAGE2Q7Z2X7 111 aa31.51■■■□□ 2.64
CSNK1E-204ENST00000403904 COL26A1Q96A83 441 aa31.51■■■□□ 2.64
CSNK1E-204ENST00000403904 EBF4Q9BQW3 602 aa31.51■■■□□ 2.64
CSNK1E-204ENST00000403904 HCN3Q9P1Z3 774 aa31.51■■■□□ 2.64
CSNK1E-204ENST00000403904 B3GALT2O43825 422 aa31.51■■■□□ 2.63
CSNK1E-204ENST00000403904 SCELO95171 688 aa31.51■■■□□ 2.63
CSNK1E-204ENST00000403904 KLK3P07288 261 aaPredicted RBP31.51■■■□□ 2.63
CSNK1E-204ENST00000403904 TPP2P29144 1249 aaPredicted RBP31.51■■■□□ 2.63
CSNK1E-204ENST00000403904 IDH3AP50213 366 aa31.51■■■□□ 2.63
CSNK1E-204ENST00000403904 SYT16Q17RD7 645 aa31.51■■■□□ 2.63
CSNK1E-204ENST00000403904 NKAIN1Q4KMZ8 207 aa31.51■■■□□ 2.63
CSNK1E-204ENST00000403904 LCN10Q6JVE6 187 aa31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms