RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 MSRAQ9UJ68 235 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 HEBP2Q9Y5Z4 205 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 U3KQV3 271 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PLRG1O43660 514 aaKnown RBP16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SH3BGRLO75368 114 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 IL3P08700 152 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ARAFP10398 606 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ANXA8P13928 327 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 DRD2P14416 443 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 BSGP35613 385 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 FRKP42685 505 aaPredicted RBP16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 KIR2DL1P43626 348 aaPredicted RBP16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PXNP49023 591 aaPredicted RBP16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 DAPP51397 102 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CDK6Q00534 326 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 EEF1A2Q05639 463 aaKnown RBP16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CDK5R2Q13319 367 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 IRF4Q15306 451 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 MTSS1LQ765P7 747 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 VTCN1Q7Z7D3 282 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 NUDT13Q86X67 352 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ZNF740Q8NDX6 193 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 OR2L8Q8NGY9 312 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CHFRQ96EP1 664 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 IL17FQ96PD4 163 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SLC6A16Q9GZN6 736 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PREBQ9HCU5 417 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 GPATCH2Q9NW75 528 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 EHD3Q9NZN3 535 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 LMCD1Q9NZU5 365 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 NDRG4Q9ULP0 352 aaKnown RBP16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CKAP5Q14008 2032 aa16.93■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TRBC2A0A5B9 178 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PRR19A6NJB7 356 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PLPP1O14494 284 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ITIH1P19827 911 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 RPL10P27635 214 aaKnown RBP16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 NTSR1P30989 418 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 MEF2AQ02078 507 aaPredicted RBP16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 MPEG1Q2M385 716 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 KIAA1614Q5VZ46 1190 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CEP68Q76N32 757 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SPARTQ8N0X7 666 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TTC29Q8NA56 475 aaPredicted RBP16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 RAB2BQ8WUD1 216 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 C12orf43Q96C57 262 aaKnown RBP16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 NEURL3Q96EH8 262 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SCARF2Q96GP6 870 aaPredicted RBP16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TPD52L3Q96J77 140 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 FERD3LQ96RJ6 166 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 NODALQ96S42 347 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PITX2Q99697 317 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 GABRG3Q99928 467 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SLC17A9Q9BYT1 436 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 BTBD1Q9H0C5 482 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 EPS8L2Q9H6S3 715 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 DDX31Q9H8H2 851 aaKnown RBP16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 KRT84Q9NSB2 600 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 VNN3Q9NY84 501 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 KIF17Q9P2E2 1029 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PRKAB1Q9Y478 270 aa16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PCYT1BQ9Y5K3 369 aaPredicted RBP16.92■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TRPM6Q9BX84 2022 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 A0A1W2PPV9 198 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 E9PQ18 207 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 hCG_2039718K7EN88 272 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SLC1A7O00341 560 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 GUCY1B2O75343 617 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 NUDT7P0C024 238 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 GRK3P35626 688 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 GALK1P51570 392 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 MC1RQ01726 317 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TEKQ02763 1124 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 C16orf72Q14CZ0 275 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SHHQ15465 462 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 MEP1AQ16819 746 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ANGPTL8Q6UXH0 198 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ATG16L2Q8NAA4 619 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PSMA8Q8TAA3 256 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 GEMIN6Q8WXD5 167 aaKnown RBP16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TM4SF18Q96CE8 201 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ZBED6CLQ96FA7 236 aaPredicted RBP16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PDXPQ96GD0 296 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 CAMK1GQ96NX5 476 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 MYADMQ96S97 322 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 PSD2Q9BQI7 771 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SARGQ9BW04 601 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 ZNF717Q9BY31 904 aaPredicted RBP16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 GABARAPL3Q9BY60 117 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 IGFLR1Q9H665 355 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 MBNL1Q9NR56 388 aaKnown RBP16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 TAAR2Q9P1P5 351 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 RAPGEFL1Q9UHV5 662 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 GMPPBQ9Y5P6 360 aa16.91■□□□□ 0.3
HLA-DQB1-204ENST00000399084 A0A1W2PP55 124 aa16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 SAP18O00422 153 aaKnown RBP16.9■□□□□ 0.3
HLA-DQB1-204ENST00000399084 GCM2O75603 506 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms