RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ADNP2Q6IQ32 1131 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 NOXRED1Q6NXP6 359 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 FAHD1Q6P587 224 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 PLET1Q6UQ28 207 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 CBLL1Q75N03 491 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 OR8H1Q8NGG4 311 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 HCAR2Q8TDS4 363 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 PIH1D2Q8WWB5 315 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 SIGLEC11Q96RL6 698 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 ADGRE3Q9BY15 652 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 POLR2J2Q9GZM3 115 aaKnown RBP9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 PSIP1O75475 530 aaKnown RBP9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 RHOCP08134 193 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 HLA-EP13747 358 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 VAMP1P23763 118 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 SGSHP51688 502 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 OLR1P78380 273 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 EFR3AQ14156 821 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 DUOXA1Q1HG43 343 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 HKDC1Q2TB90 917 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 GPR142Q7Z601 462 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 CCDC28AQ8IWP9 274 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 PEX5LQ8IYB4 626 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 ZFP41Q8N8Y5 198 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 AQP11Q8NBQ7 271 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 SIMC1Q8NDZ2 872 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 GRPEL2Q8TAA5 225 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 PHF21AQ96BD5 680 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 TADA1Q96BN2 335 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 PKP4Q99569 1192 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 HDHD5Q9BXW7 423 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 SLC22A4Q9H015 551 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 GABARAPL1Q9H0R8 117 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 LINC00597Q9H2U6 94 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 CUEDC1Q9NWM3 386 aaPredicted RBP9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 NDUFAF4Q9P032 175 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 RAB23Q9ULC3 237 aa9.49□□□□□ -0.89
PTCHD4-202ENST00000398738 A0A0B4J293 547 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 NT5C1B-RDH14C9J2C7 533 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 K7ERQ8 282 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 TPST2O60704 377 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 ENTPD6O75354 484 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 MTX2O75431 263 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 TRBC1P01850 177 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 DGKAP23743 735 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 PSMA1P25786 263 aaKnown RBP9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 APEX1P27695 318 aaKnown RBP9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 PRIM2P49643 509 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 RORCP51449 518 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 KCNJ10P78508 379 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 UGT8Q16880 541 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 TIMM50Q3ZCQ8 353 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 YIF1BQ5BJH7 314 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 LRIF1Q5T3J3 769 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 RNF219Q5W0B1 726 aaPredicted RBP9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 CXCL17Q6UXB2 119 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 ZNF852Q6ZMS4 543 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 ZNF280BQ86YH2 543 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 SYT14Q8NB59 555 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 RNF31Q96EP0 1072 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 C7orf34Q96L11 122 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 PSKH2Q96QS6 385 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 ADAM2Q99965 735 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 ARPC5LQ9BPX5 153 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 CCDC32Q9BV29 185 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 TMPRSS11EQ9UL52 423 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 GNG14A0A1W2PPG7 69 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 B4DXG7 233 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 NOS1APO75052 506 aaPredicted RBP9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 OR2B3O76000 313 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 CCNB2O95067 398 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 CLDN7O95471 211 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 ANXA5P08758 320 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 EBLN1P0CF75 366 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 GPC1P35052 558 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 KIR2DL3P43628 341 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 INPP1P49441 399 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 MAN2A2P49641 1150 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 YBEYP58557 167 aaPredicted RBP9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 CDC42P60953 191 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 MLLT1Q03111 559 aaPredicted RBP9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 TATDN3Q17R31 274 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 FBXO43Q4G163 708 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 IQCCQ4KMZ1 466 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 PXDC1Q5TGL8 231 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 MRPL14Q6P1L8 145 aaKnown RBP9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 OTOP2Q7RTS6 562 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 ZBTB2Q8N680 514 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 LMNTD1Q8N9Z9 388 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 ATP6V1C2Q8NEY4 427 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 FLCNQ8NFG4 579 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 PEX13Q92968 403 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 C1GALT1C1Q96EU7 318 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 PITX2Q99697 317 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 MGME1Q9BQP7 344 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 NXF2Q9GZY0 626 aaKnown RBP9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 GRIP1Q9Y3R0 1128 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 PRKAB1Q9Y478 270 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 V9GYH0 126 aa9.48□□□□□ -0.89
PTCHD4-202ENST00000398738 TTLL8A6PVC2 850 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms