RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 TRMOQ9BU70 441 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 AICDAQ9GZX7 198 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 KLHL31Q9H511 634 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 DMRT3Q9NQL9 472 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 ANAPC2Q9UJX6 822 aa24.1■■□□□ 1.45
U2AF1-203ENST00000398137 FLNBO75369 2602 aaKnown RBP24.1■■□□□ 1.45
U2AF1-203ENST00000398137 A0A0A6YYC8 382 aaPredicted RBP24.09■■□□□ 1.45
U2AF1-203ENST00000398137 C4orf51C9J302 202 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 I3L1I5 382 aaPredicted RBP24.09■■□□□ 1.45
U2AF1-203ENST00000398137 SH3BGRLO75368 114 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 TBX6O95947 436 aaPredicted RBP24.09■■□□□ 1.45
U2AF1-203ENST00000398137 ENO1P06733 434 aaKnown RBP24.09■■□□□ 1.45
U2AF1-203ENST00000398137 CHRNGP07510 517 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 ZNF888P0CJ79 500 aaPredicted RBP24.09■■□□□ 1.45
U2AF1-203ENST00000398137 NEFHP12036 1026 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 BGNP21810 368 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 PHEXP78562 749 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 IFT88Q13099 833 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 CHAF1BQ13112 559 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 SLC9A5Q14940 896 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 SGO1Q5FBB7 561 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 TCHHL1Q5QJ38 904 aaPredicted RBP24.09■■□□□ 1.45
U2AF1-203ENST00000398137 FRG2Q64ET8 278 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 WDR20Q8TBZ3 569 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 ZDHHC19Q8WVZ1 309 aaPredicted RBP24.09■■□□□ 1.45
U2AF1-203ENST00000398137 THAP4Q8WY91 577 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 MTFMTQ96DP5 389 aaKnown RBP24.09■■□□□ 1.45
U2AF1-203ENST00000398137 FRG2BQ96QU4 278 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 MS4A8Q9BY19 250 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 SLC29A3Q9BZD2 475 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 ELOVL6Q9H5J4 265 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 TNFRSF12AQ9NP84 129 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 TCFL5Q9UL49 500 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 TSC22D4Q9Y3Q8 395 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 MAU2Q9Y6X3 613 aa24.09■■□□□ 1.45
U2AF1-203ENST00000398137 FOXS1O43638 330 aa24.08■■□□□ 1.45
U2AF1-203ENST00000398137 SERPINE1P05121 402 aa24.08■■□□□ 1.45
U2AF1-203ENST00000398137 HMOX2P30519 316 aa24.08■■□□□ 1.45
U2AF1-203ENST00000398137 PIK3CBP42338 1070 aa24.08■■□□□ 1.45
U2AF1-203ENST00000398137 OR1D4P47884 311 aa24.08■■□□□ 1.45
U2AF1-203ENST00000398137 RAB8AP61006 207 aa24.08■■□□□ 1.45
U2AF1-203ENST00000398137 STXBP1P61764 594 aaKnown RBP24.08■■□□□ 1.45
U2AF1-203ENST00000398137 CES4AQ5XG92 561 aa24.08■■□□□ 1.45
U2AF1-203ENST00000398137 OR9A4Q8NGU2 314 aa24.08■■□□□ 1.45
U2AF1-203ENST00000398137 OR6Y1Q8NGX8 325 aa24.08■■□□□ 1.45
U2AF1-203ENST00000398137 UTP15Q8TED0 518 aaKnown RBP24.08■■□□□ 1.45
U2AF1-203ENST00000398137 FARSBQ9NSD9 589 aaKnown RBP24.08■■□□□ 1.45
U2AF1-203ENST00000398137 ADGRE2Q9UHX3 823 aa24.08■■□□□ 1.45
U2AF1-203ENST00000398137 SNX6Q9UNH7 406 aa24.08■■□□□ 1.45
U2AF1-203ENST00000398137 LRIT2A6NDA9 550 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 MAGEB17A8MXT2 336 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 MKRN2OSH3BPM6 223 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 MANBAO00462 879 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 ATP8B1O43520 1251 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 CRCPO75575 148 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 B3GALT4O96024 378 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 TGFB1P01137 390 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 AGXTP21549 392 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 ARRB2P32121 409 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 FOXA1P55317 472 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 RPS13P62277 151 aaKnown RBP24.07■■□□□ 1.44
U2AF1-203ENST00000398137 DCDP81605 110 aaKnown RBP24.07■■□□□ 1.44
U2AF1-203ENST00000398137 FAM53BQ14153 422 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 NKAIN1Q4KMZ8 207 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 DEFB134Q4QY38 66 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 ARL13AQ5H913 290 aaPredicted RBP24.07■■□□□ 1.44
U2AF1-203ENST00000398137 ABHD13Q7L211 337 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 CUZD1Q86UP6 607 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 TMEM151BQ8IW70 566 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 METTL6Q8TCB7 284 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 GAL3ST3Q96A11 431 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 MS4A6EQ96DS6 147 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 F2RL3Q96RI0 385 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 OR51B5Q9H339 312 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 ANKHQ9HCJ1 492 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 TIMM22Q9Y584 194 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 SLC22A7Q9Y694 548 aa24.07■■□□□ 1.44
U2AF1-203ENST00000398137 A0A0G2JN53 185 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 URADA6NGE7 173 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 ZNF860A6NHJ4 632 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 ERI3O43414 337 aaKnown RBP24.06■■□□□ 1.44
U2AF1-203ENST00000398137 KLHL18O94889 574 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 ALOX12P18054 663 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 HTR6P50406 440 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 PPP2R2AP63151 447 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 HERC3Q15034 1050 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 NCF4Q15080 339 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 ADPRMQ3LIE5 342 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 PRMT9Q6P2P2 845 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 PDSS2Q86YH6 399 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 AFAP1L2Q8N4X5 818 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 SELENOMQ8WWX9 145 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 MVB12AQ96EY5 273 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 MMABQ96EY8 250 aaPredicted RBP24.06■■□□□ 1.44
U2AF1-203ENST00000398137 CMTM7Q96FZ5 175 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 HBEGFQ99075 208 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 DPH2Q9BQC3 489 aaPredicted RBP24.06■■□□□ 1.44
U2AF1-203ENST00000398137 REXO4Q9GZR2 422 aaKnown RBP24.06■■□□□ 1.44
U2AF1-203ENST00000398137 SLC22A11Q9NSA0 550 aa24.06■■□□□ 1.44
U2AF1-203ENST00000398137 CDC14AQ9UNH5 594 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms