RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 ALPPP05187 535 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 ANPEPP15144 967 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 BMP7P18075 431 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 RBMS1P29558 406 aaKnown RBP7.92□□□□□ -1.14
PTPRD-204ENST00000397606 KIR2DL1P43626 348 aaPredicted RBP7.92□□□□□ -1.14
PTPRD-204ENST00000397606 METAP1P53582 386 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 INHBCP55103 352 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 ZNF630Q2M218 657 aaPredicted RBP7.92□□□□□ -1.14
PTPRD-204ENST00000397606 DEFB110Q30KQ9 67 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 IFI44LQ53G44 452 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 TMEM92Q6UXU6 159 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 ARMC8Q8IUR7 673 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 MCATQ8IVS2 390 aaKnown RBP7.92□□□□□ -1.14
PTPRD-204ENST00000397606 SFRP1Q8N474 314 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 LILRA3Q8N6C8 439 aaPredicted RBP7.92□□□□□ -1.14
PTPRD-204ENST00000397606 METTL27Q8N6F8 245 aaPredicted RBP7.92□□□□□ -1.14
PTPRD-204ENST00000397606 LINC00615Q96LM1 132 aaPredicted RBP7.92□□□□□ -1.14
PTPRD-204ENST00000397606 SERINC2Q96SA4 455 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 SORT1Q99523 831 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 BHLHE41Q9C0J9 482 aaPredicted RBP7.92□□□□□ -1.14
PTPRD-204ENST00000397606 CHRDQ9H2X0 955 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 KIR3DX1Q9H7L2 352 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 TM9SF3Q9HD45 589 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 OTOL1A6NHN0 477 aaPredicted RBP7.92□□□□□ -1.14
PTPRD-204ENST00000397606 TTC36A6NLP5 189 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 ZBTB11O95625 1053 aaPredicted RBP7.92□□□□□ -1.14
PTPRD-204ENST00000397606 CD247P20963 164 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 UQCRC2P22695 453 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 CCKBRP32239 447 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 CASRP41180 1078 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 POLE2P56282 527 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 MTAPQ13126 283 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 GPR18Q14330 331 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 GGTA1PQ4G0N0 100 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 OGFOD2Q6N063 350 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 CEACAM20Q6UY09 585 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 CHMP1BQ7LBR1 199 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 ZNF527Q8NB42 609 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 DAZLQ92904 295 aaKnown RBP7.92□□□□□ -1.14
PTPRD-204ENST00000397606 TCTN2Q96GX1 697 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 MYCBPQ99417 103 aaPredicted RBP7.92□□□□□ -1.14
PTPRD-204ENST00000397606 CD180Q99467 661 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 C8orf4Q9NR00 106 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 POMPQ9Y244 141 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 HMX2A2RU54 273 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 AQP12BA6NM10 295 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 POLR1CO15160 346 aaPredicted RBP7.92□□□□□ -1.14
PTPRD-204ENST00000397606 ADAMDEC1O15204 470 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 ZNF267Q14586 743 aaPredicted RBP7.92□□□□□ -1.14
PTPRD-204ENST00000397606 C14orf28Q4W4Y0 310 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 ANKRD26P1Q6NSI1 321 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 IQCHQ86VS3 1027 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 AQP12AQ8IXF9 295 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 CCDC116Q8IYX3 515 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 PQLC1Q8N2U9 271 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 LRRC25Q8N386 305 aaPredicted RBP7.92□□□□□ -1.14
PTPRD-204ENST00000397606 OR56A3Q8NH54 315 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 CMKLR1Q99788 373 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 EURLQ9NYK6 297 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 SERGEFQ9UGK8 458 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 AP1M2Q9Y6Q5 423 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 ZSWIM8A7E2V4 1837 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 A0A096LPI6 279 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 TP73O15350 636 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 COL9A1P20849 921 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 PRDX3P30048 256 aaKnown RBP7.92□□□□□ -1.14
PTPRD-204ENST00000397606 CDK6Q00534 326 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 CCINQ13939 588 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 MSANTD1Q6ZTZ1 278 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 AMIGO2Q86SJ2 522 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 IL22RA1Q8N6P7 574 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 ZNF248Q8NDW4 579 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 ASB9Q96DX5 294 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 MSLNLQ96KJ4 702 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 YIPF4Q9BSR8 244 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 RBCK1Q9BYM8 510 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 OR8D2Q9GZM6 311 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 GEMIN8Q9NWZ8 242 aaKnown RBP7.92□□□□□ -1.14
PTPRD-204ENST00000397606 SLC17A4Q9Y2C5 497 aa7.92□□□□□ -1.14
PTPRD-204ENST00000397606 RALGAPA2Q2PPJ7 1873 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 H0YIV9 168 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 SCN2BO60939 215 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 CEACAM5P06731 702 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 DRD3P35462 400 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 FOXA1P55317 472 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 DECR1Q16698 335 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 COQ5Q5HYK3 327 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 BLOC1S3Q6QNY0 202 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 TSSK4Q6SA08 328 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 HIPK1Q86Z02 1210 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 KRTCAP2Q8N6L1 136 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 SLC37A2Q8TED4 501 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 C16orf78Q8WTQ4 265 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 SLC38A4Q969I6 547 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 APIPQ96GX9 242 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 TBL1XR1Q9BZK7 514 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 TTYH1Q9H313 450 aaPredicted RBP7.91□□□□□ -1.14
PTPRD-204ENST00000397606 S100A14Q9HCY8 104 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 TBC1D29Q9UFV1 150 aa7.91□□□□□ -1.14
PTPRD-204ENST00000397606 GFYI3L273 518 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms