RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 NEK2P51955 445 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 NAGLUP54802 743 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 EMP2P54851 167 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 DNAJB13P59910 316 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 RPS13P62277 151 aaKnown RBP20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 LCP2Q13094 533 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 CHAF1BQ13112 559 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 PCLAFQ15004 111 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 TMEM35AQ53FP2 167 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 KHDRBS2Q5VWX1 349 aaKnown RBP20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 FRG2Q64ET8 278 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 PCSK4Q6UW60 755 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 CHSY3Q70JA7 882 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 QRFPRQ96P65 431 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 KCNC2Q96PR1 638 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 FRG2BQ96QU4 278 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 OXSMQ9NWU1 459 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 P4HTMQ9NXG6 502 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 TRPS1Q9UHF7 1281 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 ZNF225Q9UK10 706 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 STK38LQ9Y2H1 464 aa20.02■□□□□ 0.79
TSPAN4-206ENST00000397408 ATRXP46100 2492 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 PIEZO2Q9H5I5 2752 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 SAP18O00422 153 aaKnown RBP20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 OR4F21O95013 312 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 FAM87AP0C7U9 286 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 CERS1P27544 350 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 POLE2P56282 527 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 IFT88Q13099 833 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 LIPMQ5VYY2 423 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 FAM219BQ5XKK7 198 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 FAAH2Q6GMR7 532 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 GPRIN3Q6ZVF9 776 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 UBE3DQ7Z6J8 389 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 C10orf107Q8IVU9 208 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 SRFBP1Q8NEF9 429 aaKnown RBP20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 NACC2Q96BF6 587 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 OR1F2PQ96R84 312 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 MESP1Q9BRJ9 268 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 VN1R1Q9GZP7 353 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 ELOVL6Q9H5J4 265 aa20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 CLK4Q9HAZ1 481 aaKnown RBP20.01■□□□□ 0.79
TSPAN4-206ENST00000397408 RTCAO00442 366 aaKnown RBP20■□□□□ 0.79
TSPAN4-206ENST00000397408 SOCS6O14544 535 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 B3GALT2O43825 422 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 TYROBPO43914 113 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 CDC123O75794 336 aaPredicted RBP20■□□□□ 0.79
TSPAN4-206ENST00000397408 RNH1P13489 461 aaKnown RBP20■□□□□ 0.79
TSPAN4-206ENST00000397408 IL10P22301 178 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 RAP1GDS1P52306 607 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 EFNA3P52797 238 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 MTTPP55157 894 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 TNFAIP8L3Q5GJ75 292 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 CFAP157Q5JU67 520 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 DEPDC1Q5TB30 811 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 EXOC3L1Q86VI1 746 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 CA13Q8N1Q1 262 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 CDYL2Q8N8U2 506 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 TBC1D20Q96BZ9 403 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 MTFMTQ96DP5 389 aaKnown RBP20■□□□□ 0.79
TSPAN4-206ENST00000397408 PGM2Q96G03 612 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 SERINC2Q96SA4 455 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 CENPKQ9BS16 269 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 TRIM55Q9BYV6 548 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 ING2Q9H160 280 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 FBXL4Q9UKA2 621 aa20■□□□□ 0.79
TSPAN4-206ENST00000397408 MED13Q9UHV7 2174 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 NUP210LQ5VU65 1888 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 AGPSO00116 658 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 PSMD12O00232 456 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 FOXE1O00358 373 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 ATXN7O15265 892 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 DNAJB5O75953 348 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 FHP07954 510 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 MYZAPP0CAP1 466 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 SSR2P43308 183 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 RRADP55042 308 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 PKNOX1P55347 436 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 RUNX2Q13950 521 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 CASP8Q14790 479 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 SGO1Q5FBB7 561 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 C10orf62Q5T681 223 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 KIRREL2Q6UWL6 708 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 ZNF793Q6ZN11 406 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 FRMD7Q6ZUT3 714 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 MED25Q71SY5 747 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 APLFQ8IW19 511 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 TMEM102Q8N9M5 508 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 MYRIPQ8NFW9 859 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 C8orf44Q96CB5 159 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 TBCDQ9BTW9 1192 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 NPLQ9BXD5 320 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 ROGDIQ9GZN7 287 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 PRDM7Q9NQW5 492 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 LANCL2Q9NS86 450 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 SNX6Q9UNH7 406 aa19.99■□□□□ 0.79
TSPAN4-206ENST00000397408 OR2W5A6NFC9 320 aa19.98■□□□□ 0.79
TSPAN4-206ENST00000397408 ALOX12BO75342 701 aa19.98■□□□□ 0.79
TSPAN4-206ENST00000397408 ETHE1O95571 254 aa19.98■□□□□ 0.79
TSPAN4-206ENST00000397408 ACPPP15309 386 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms